Authors: Toivari, MerviAff1, IDs10529023034432_cor1, Vehkomäki, Maija-Leena, Ruohonen, Laura, Penttilä, Merja, Wiebe, Marilyn G.
Superior Title: Biotechnology Letters. 46(1):69-83
Authors: Kostiainen, Mauri A., Priimagi, Arri, Timonen, Jaakko V.I., Ras, Robin H.A., Sammalkorpi, Maria, Penttilä, Merja, Ikkala, Olli, Linder, Markus B.
Contributors: Department of Bioproducts and Biosystems, Department of Applied Physics, Department of Chemistry and Materials Science, Center of Excellence in Life-Inspired Hybrid Materials, LIBER, Biohybrid Materials, Active Matter, Soft Matter and Wetting, Soft Materials Modelling, Molecular Materials, Biomolecular Materials, Aalto-yliopisto, Aalto University
Subject Terms: biological production, feedback loop, homeostasis, living materials, memory, non-equilibrium, stimuli-responsive
Relation: info:eu-repo/grantAgreement/EC/H2020/803937/EU//InterActive; Advanced Functional Materials; Kostiainen, M A, Priimagi, A, Timonen, J V I, Ras, R H A, Sammalkorpi, M, Penttilä, M, Ikkala, O & Linder, M B 2024, ' Materials Inspired by Living Functions ', Advanced Functional Materials . https://doi.org/10.1002/adfm.202402097; PURE UUID: 96982f12-d6d1-4406-9a3f-a6dbebeddfd4; PURE ITEMURL: https://research.aalto.fi/en/publications/96982f12-d6d1-4406-9a3f-a6dbebeddfd4; PURE LINK: http://www.scopus.com/inward/record.url?scp=85188073620&partnerID=8YFLogxK; https://aaltodoc.aalto.fi/handle/123456789/127442; URN:NBN:fi:aalto-202404113065
Authors: Kakko, Natalia, Rantasalo, Anssi, Koponen, Tino, Vidgren, Virve, Kannisto, Matti, Maiorova, Natalia, Nygren, Heli, Mojzita, Dominik, Penttilä, Merja, Jouhten, Paula
Superior Title: ACS Synth Biol
Relation: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10127448/; http://www.ncbi.nlm.nih.gov/pubmed/36976676; http://dx.doi.org/10.1021/acssynbio.2c00467
Authors: Pylkkänen, Robert, Werner, Daniel, Bishoyi, Ajit, Weil, Dominik, Scoppola, Ernesto, Wagermaier, Wolfgang, Safeer, Adil, Bahri, Salima, Baldus, Marc, Paananen, Arja, Penttilä, Merja, Szilvay, Géza R., Mohammadi, Pezhman
Superior Title: Sci Adv
Subject Terms: Physical and Materials Sciences
Relation: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9946349/; http://dx.doi.org/10.1126/sciadv.ade5417
Authors: Ylinen, AnnaAff1, IDs1293402201845x_cor1, de Ruijter, Jorg C., Jouhten, PaulaAff1, Aff2, Penttilä, MerjaAff1, Aff3
Superior Title: Microbial Cell Factories. 21(1)
Authors: Castillo, Sandra, Tenkanen, Tuula, Jouhten, Paula, Boer, Harry, Blomster Andberg, Martina, Revuelta, Alejandro, Peddinti, Gopal, Borisova, Anna, Penttilä, Merja
Subject Terms: Bioinformatic methods development, Bioinformatics and computational biology not elsewhere classified, Enzymes, Structural biology incl. macromolecular modelling
Authors: Pylkkänen, Robert, Mohammadi, Pezhman, Liljeström, Ville, Plazinski, Wojciech, Beaune, Gregory, Timonen, Jaakko V.I., Penttilä, Merja
Superior Title: Pylkkänen , R , Mohammadi , P , Liljeström , V , Plazinski , W , Beaune , G , Timonen , J V I & Penttilä , M 2022 , ' Correction: β-1,3-Glucan synthesis, novel supramolecular self-assembly, characterization and application : Correction for ‘β-1,3-Glucan synthesis, novel supramolecular self-assembly, characterization and application’ by Robert Pylkkänen et al., Nanoscale, 2022, https://doi.org/10.1039/D2NR02731C. ' , Nanoscale , no. 41 , pp. 15542 . https://doi.org/10.1039/D2NR90202H
Authors: Pylkkänen, Robert, Mohammadi, Pezhman, Liljeström, Ville, Płaziński, Wojciech, Beaune, Grégory, Timonen, Jaakko V. I., Penttilä, Merja
Superior Title: Pylkkänen , R , Mohammadi , P , Liljeström , V , Płaziński , W , Beaune , G , Timonen , J V I & Penttilä , M 2022 , ' β-1,3-Glucan synthesis, novel supramolecular self-assembly, characterization and application ' , Nanoscale , vol. 14 , pp. 15533-15541 . https://doi.org/10.1039/D2NR02731C
Superior Title: Sabzevari , M , Szedmak , S , Penttilä , M , Jouhten , P & Rousu , J 2022 , ' Strain design optimization using reinforcement learning ' , PLoS Computational Biology , vol. 18 , no. 6 , e1010177 . https://doi.org/10.1371/journal.pcbi.1010177
Subject Terms: Escherichia coli/genetics, Metabolic Engineering/methods, Metabolic Networks and Pathways, Saccharomyces cerevisiae/genetics, Synthetic Biology
Authors: Ylinen, Anna, Salusjärvi, Laura, Toivari, Mervi, Penttilä, Merja
Superior Title: Ylinen , A , Salusjärvi , L , Toivari , M & Penttilä , M 2022 , ' Control of D-lactic acid content in P(LA-3HB) copolymer in the yeast Saccharomyces cerevisiae using a synthetic gene expression system ' , Metabolic Engineering Communications , vol. 14 , e00199 . https://doi.org/10.1016/j.mec.2022.e00199
Subject Terms: Copolymer, Doxycycline, Gene expression, PHA, Tet-on, Yeast
File Description: application/pdf
Authors: Garrigós-Martínez, Javier, Vuoristo, Kiira, Nieto-Taype, Miguel Angel, Tähtiharju, Juha, Uusitalo, Jaana, Tukiainen, Pauliina, Schmid, ChristianAff5, Aff6, Tolstorukov, Ilya, Madden, Knut, Penttilä, Merja, Montesinos-Seguí, José Luis, Valero, Francisco, Glieder, AntonAff5, Aff6, Garcia-Ortega, Xavier
Superior Title: Microbial Cell Factories. 20(1)
Authors: Voutilainen, SanniAff1, Heinonen, MarkusAff2, Aff3, Andberg, Martina, Jokinen, Emmi, Maaheimo, Hannu, Pääkkönen, Johan, Hakulinen, Nina, Rouvinen, Juha, Lähdesmäki, Harri, Kaski, SamuelAff2, Aff3, Rousu, JuhoAff2, Aff3, Penttilä, Merja, Koivula, Anu
Superior Title: Applied Microbiology and Biotechnology. 104(24):10515-10529
Authors: Maiser, Eric, Horbelt, Jessica, Thoma, Martin, Baumgarten, Yannick, Colosimo, Bianca Maria, Penttilä, Merja, Tolio, Tullio, Trotta, Gianluca, Hörcher, Günter, Vilda, Gintaras
Subject Terms: Biointelligenz, Biointelligente Produktion
File Description: application/pdf
Authors: Mohammadi, Pezhman, Gandier, Julie-Anne, Nonappa, Nonappa, Wagermaier, Wolfgang, Miserez, Ali, Penttilä, Merja
Superior Title: Mohammadi , P , Gandier , J-A , Nonappa , N , Wagermaier , W , Miserez , A & Penttilä , M 2021 , ' Bioinspired Functionally Graded Composite Assembled Using Cellulose Nanocrystals and Genetically Engineered Proteins with Controlled Biomineralization ' , Advanced Materials , vol. 33 , no. 42 , 2102658 . https://doi.org/10.1002/adma.202102658
Subject Terms: biomaterials, biomineralization, cellulose nanocrystals, dental implants, functional gradients, phase separation, protein engineering
File Description: application/pdf
Authors: Ylinen, Anna, Maaheimo, Hannu, Anghelescu-Hakala, Adina, Penttilä, Merja, Salusjärvi, Laura, Toivari, Mervi
Superior Title: Ylinen , A , Maaheimo , H , Anghelescu-Hakala , A , Penttilä , M , Salusjärvi , L & Toivari , M 2021 , ' Production of D-lactic acid containing polyhydroxyalkanoate polymers in yeast Saccharomyces cerevisiae ' , Journal of industrial microbiology and biotechnology , vol. 48 , no. 5-6 , kuab028 . https://doi.org/10.1093/jimb/kuab028
Subject Terms: Biopolymer, Copolymer, PHB, Poly(D-lactic acid), Saccharomyces cerevisiae
File Description: application/pdf
Authors: Allahverdiyeva, Yagut, Aro, Eva Mari, van Bavel, Bert, Escudero, Carlos, Funk, Christiane, Heinonen, Jarna, Herfindal, Lars, Lindblad, Peter, Mäkinen, Sari, Penttilä, Merja, Sivonen, Kaarina, Skogen Chauton, Matilde, Skomedal, Hanne, Skjermo, Jorunn
Superior Title: Allahverdiyeva , Y , Aro , E M , van Bavel , B , Escudero , C , Funk , C , Heinonen , J , Herfindal , L , Lindblad , P , Mäkinen , S , Penttilä , M , Sivonen , K , Skogen Chauton , M , Skomedal , H & Skjermo , J 2021 , ' NordAqua, a Nordic Center of Excellence to develop an algae-based photosynthetic production platform ' , Physiologia Plantarum , vol. 173 , no. 2 , pp. 507-513 . https://doi.org/10.1111/ppl.13394
Subject Terms: /dk/atira/pure/sustainabledevelopmentgoals/decent_work_and_economic_growth, SDG 8 - Decent Work and Economic Growth, /dk/atira/pure/sustainabledevelopmentgoals/responsible_consumption_and_production, SDG 12 - Responsible Consumption and Production
Authors: de Ruijter, Jorg, Igarashi, Kiyohiko, Penttilä, Merja
Superior Title: de Ruijter , J , Igarashi , K & Penttilä , M 2021 , ' The Lipomyces starkeyi gene Ls120451 encodes a cellobiose transporter that enables cellobiose fermentation in Saccharomyces cerevisiae ' , FEMS Yeast Research , vol. 20 , no. 3 , foaa019 . https://doi.org/10.1093/femsyr/foaa019
Subject Terms: CdtG, Cellobiose fermentation, Cellodextrin transporter, Lipomyces starkeyi, Saccharomyces cerevisiae, Sugar transporter
File Description: application/pdf
Authors: Garrigos, Javier, Vuoristo, Kiira, Nieto-Taype, Miguel Angel, Tähtiharju, Juha, Uusitalo, Jaana, Tukiainen, Pauliina, Schmid, Christian, Tolstorukov, Ilya, Madden, Knut, Penttilä, Merja, Montesinos Seguí, José Luis, Valero Barranco, Francisco, Glieder, Anton, Garcia-Ortega, Xavier
Subject Terms: Komagataella phaffii (Pichia pastoris), Recombinant protein production, Methanol-free bioprocesses, Expression system characterisation, Promoter regulation, Bioprocess development
File Description: application/pdf
Relation: European Commission No 730976; Microbial cell factories; Vol. 20 (march 2021); https://ddd.uab.cat/record/255373; urn:10.1186/s12934-021-01564-9; urn:oai:ddd.uab.cat:255373; urn:pmcid:PMC7986505; urn:pmc-uid:7986505; urn:oai:pubmedcentral.nih.gov:7986505; urn:pmid:33757505; urn:scopus_id:85102899793; urn:wos_id:000632855000001; urn:oai:egreta.uab.cat:publications/fbe82c1a-f731-43be-beca-810eba9d0486
Availability: https://ddd.uab.cat/record/255373
Authors: Nappa, Marja, Lienemann, Michael, Tossi, Camilla, Blomberg, Peter, Jäntti, Jussi, Tittonen, Ilkka Juhani, Penttilä, Merja
Superior Title: Nappa , M , Lienemann , M , Tossi , C , Blomberg , P , Jäntti , J , Tittonen , I J & Penttilä , M 2020 , ' Solar-Powered Carbon Fixation for Food and Feed Production Using Microorganisms—A Comparative Techno-Economic Analysis ' , ACS Omega , vol. 5 , no. 51 , pp. 33242–33252 . https://doi.org/10.1021/acsomega.0c04926
Subject Terms: /dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energy, name=SDG 7 - Affordable and Clean Energy, /dk/atira/pure/sustainabledevelopmentgoals/partnerships, name=SDG 17 - Partnerships for the Goals
File Description: application/pdf
Authors: Mohammadi, Pezhman, Jonkergouw, Christopher, Beaune, Gregory, Engelhardt, Peter, Kamada, Ayaka, Timonen, Jaakko V.I., Knowles, Tuomas P.J., Penttilä, Merja, Linder, Markus B.
Superior Title: Mohammadi , P , Jonkergouw , C , Beaune , G , Engelhardt , P , Kamada , A , Timonen , J V I , Knowles , T P J , Penttilä , M & Linder , M B 2020 , ' Controllable coacervation of recombinantly produced spider silk protein using kosmotropic salts ' , Journal of Colloid and Interface Science , vol. 560 , pp. 149-160 . https://doi.org/10.1016/j.jcis.2019.10.058
Subject Terms: liquid-liquid phase transition, coacervate, silk-like protein, genetic engineering, protein engineering, salting out, kosmotropic salt, classical nucleation theory