Bibliographic Details
| Title: |
Environmental data related to amplicon sequencing of benthic heterotrophic protists of the southern Baltic Sea, in 2020-2022 |
| Authors: |
Sachs, Maria, Dünn, Manon |
| Publisher Information: |
PANGAEA |
| Publication Year: |
2023 |
| Collection: |
PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen) |
| Subject Terms: |
AL570, AL570_75-1, AL570_78-1, Alkor (1990), Area/locality, Baltic Sea, Brackish waters, Calculated, Cruise/expedition, DAM sustainMare - MGF Baltic Sea: Exclusion of mobile bottom-contact fishing in marine protected areas of the German Exclusive Economic Zone of the Baltic Sea, Date/Time of event, DEPTH, sediment/rock, bottom/maximum, top/minimum, Device type, Elevation of event, Elisabeth Mann Borgese, EMB238, EMB238_10-4, EMB238_13-6, EMB238_15-5, EMB238_17-6, EMB238_18-6, EMB238_2-4, EMB238_5-5, EMB238_8-5, EMB267, EMB267_10-2, EMB267_10-3 |
| Subject Geographic: |
MEDIAN LATITUDE: 54.452870 * MEDIAN LONGITUDE: 12.593818 * SOUTH-BOUND LATITUDE: 54.248971 * WEST-BOUND LONGITUDE: 10.686013 * NORTH-BOUND LATITUDE: 54.773210 * EAST-BOUND LONGITUDE: 14.332776 * DATE/TIME START: 2020-05-27T12:11:00 * DATE/TIME END: 2022-04-03T14:10:24 * MINIMUM DEPTH, sediment/rock: 0.005 m * MAXIMUM DEPTH, sediment/rock: 0.175 m |
| Description: |
We aimed to explore the community compostion of benthic heterotrophic protists in three different regions of the southern Baltic Sea - Fehmarnbelt, Oderbank and Roennebank. Sediment samples where collected with a multicorer system and sliced into layered depth profile during three cruises in 2020, 2021 and 2022 with research vessels Elisabeth Mann Borgese (2020, EMB238 and 2021, EMB267) and Alkor (2022, AL570). We performed a paired-end NovaSeq sequencing (2 × 150 bp) run of the amplified V9 region of the 18S rDNA. This dataset includes the environmental data related to the sequencing study including sample IDs, region, sediment depth, station data, salinity and median grain size. |
| Document Type: |
dataset |
| File Description: |
text/tab-separated-values, 1103 data points |
| Language: |
English |
| Relation: |
Sachs, Maria; Dünn, Manon; Arndt, Hartmut (2023): Benthic Heterotrophic Protist Communities of the Southern Baltic Analyzed with the Help of Curated Metabarcoding Studies. Biology, 12(7), 1010, https://doi.org/10.3390/biology12071010; Sachs, Maria; Dünn, Manon (2023): Amplicon sequence variant table of benthic heterotrophic protists of the southern Baltic Sea sampled in 2020-2022. PANGAEA, https://doi.org/10.1594/PANGAEA.961796; https://doi.pangaea.de/10.1594/PANGAEA.961784; https://doi.org/10.1594/PANGAEA.961784 |
| DOI: |
10.1594/PANGAEA.961784 |
| Availability: |
https://doi.org/10.1594/PANGAEA.96178410.3390/biology1207101010.1594/PANGAEA.961796 |
| Rights: |
CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess |
| Accession Number: |
edsbas.75548A63 |
| Database: |
BASE |
