Authors: Junya Wang, Yi-Jiao Zhang, Cong Xu, Jiaze Li, Jiachen Sun, Jiarong Xie, Ling Feng, Tianshou Zhou, Yanqing Hu

Superior Title: Nature Communications, Vol 15, Iss 1, Pp 1-11 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/7ab3508da09844f59fe78c1165052da2

Authors: Zihao Wang, Songhao Luo, Zhenquan Zhang, Tianshou Zhou, Jiajun Zhang

Superior Title: PLoS Computational Biology, Vol 19, Iss 12, p e1011722 (2023)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/9e800cd99e6f4a9e9ea3ba6a8af60fe4

Authors: Songhao Luo, Zhenquan Zhang, Zihao Wang, Xiyan Yang, Xiaoxuan Chen, Tianshou Zhou, Jiajun Zhang

Superior Title: Royal Society Open Science, Vol 10, Iss 4 (2023)

Subject Terms: inference, transcriptional bursting, single-cell snapshot, non-Markovian, gene expression, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2054-5703

Access URL: https://doaj.org/article/99e47427ff81441fada2441766e33d6a

Authors: Qiqi Deng, Aimin Chen, Huahai Qiu, Tianshou Zhou

Superior Title: Mathematical Biosciences and Engineering, Vol 19, Iss 8, Pp 8426-8451 (2022)

Subject Terms: transcription, rna nuclear retention, molecular memory, non-markov model, transcription noise, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/a1f02bf17ff4474687f0d1628040a669

Authors: Siyuan Wu, Tianshou Zhou, Tianhai Tian

Superior Title: npj Systems Biology and Applications, Vol 8, Iss 1, Pp 1-9 (2022)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2056-7189

Access URL: https://doaj.org/article/403867e3806c403c8dc57d2e169ce332

Authors: Heli Tan, Tuoqi Liu, Tianshou Zhou

Superior Title: Mathematical Biosciences and Engineering, Vol 19, Iss 2, Pp 2095-2119 (2022)

Subject Terms: erna, enhancer, gene expression model, e-p looping, chemical master equation, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/a3a1c0cc531f448faca8c45ae1468e75

Authors: Xiyan Yang, Zihao Wang, Yahao Wu, Tianshou Zhou, Jiajun Zhang

Superior Title: Mathematical Biosciences and Engineering, Vol 19, Iss 4, Pp 3313-3336 (2022)

Subject Terms: transcription bursting, promoter cycle, multi-on mechanism, noise, timing, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/a2de209541bb402bbb5317f2c81a3ae2

Authors: Meiling Chen, Tianshou Zhou, Jiajun Zhang

Superior Title: Mathematical Biosciences and Engineering, Vol 18, Iss 4, Pp 4713-4730 (2021)

Subject Terms: gene-expression noise, stochasticity, promoter structure, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/605d52e9a87c4710a99264784152b70f

Authors: Jiangyong Wei, Tianshou Zhou, Xinan Zhang, Tianhai Tian

Superior Title: Genomics, Proteomics & Bioinformatics, Vol 19, Iss 2, Pp 306-318 (2021)

Subject Terms: Single-cell heterogeneity, Pseudotime trajectory, Manifold learning, Bhattacharyya kernel, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1672022921000474; https://doaj.org/toc/1672-0229

Access URL: https://doaj.org/article/6ba432b316d04ca8b6b67af3b350dcb3

Authors: Zhenquan Zhang, Junhao Liang, Zihao Wang, Jiajun Zhang, Tianshou Zhou

Superior Title: Mathematical Biosciences and Engineering, Vol 17, Iss 5, Pp 5304-5325 (2020)

Subject Terms: gene model, noise, markov process, non-markov process, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/5070bf42a2be4fa7a97deb85c5383982

Authors: Jiajun Zhang, Tianshou Zhou

Superior Title: Mathematical Biosciences and Engineering, Vol 16, Iss 5, Pp 6134-6166 (2019)

Subject Terms: stochastic transcription, chemical master equation, unimodal distribution, bimodal distribution, cellular phenotype, Biotechnology, TP248.13-248.65, Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1551-0018

Access URL: https://doaj.org/article/2146f175c6784500b050bfa1c8af3feb

Authors: Junhao Liang, Tianshou Zhou, Changsong Zhou

Superior Title: Frontiers in Systems Neuroscience, Vol 14 (2020)

Subject Terms: excitation-inhibition balance, neuronal avalanches, criticality, cortical dynamics, mean-field theory, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnsys.2020.580011/full; https://doaj.org/toc/1662-5137

Access URL: https://doaj.org/article/6166bf5a47184adb8622a159ca8dcb51

Authors: Baohua Qiu, Tianshou Zhou, Jiajun Zhang

Superior Title: Royal Society Open Science, Vol 7, Iss 2 (2020)

Subject Terms: stochastic gene expression, first-passage times, chemical master equation, stochastic models, fractional killing, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2054-5703

Access URL: https://doaj.org/article/ceb61fad53b04a84819f3c45709da9f7

Authors: Jiajun Zhang, Qing Nie, Tianshou Zhou

Superior Title: Frontiers in Genetics, Vol 10 (2019)

Subject Terms: cell fate decision, single-cell data, developmental landscape, cell-type dynamics, cellular process, Genetics, QH426-470

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fgene.2019.01280/full; https://doaj.org/toc/1664-8021

Access URL: https://doaj.org/article/4e8f6b70736546528f601d1dbd21f6a6

Authors: Bor-Sen Chen, Xiangyun Lin, Weihai Zhang, Tianshou Zhou

Superior Title: Complexity, Vol 2018 (2018)

Subject Terms: Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://doaj.org/toc/1076-2787; https://doaj.org/toc/1099-0526

Access URL: https://doaj.org/article/69483ee6dfda46b4b9ecf7f7031145f1

Authors: Tuoqi Liu, Jiajun Zhang, Tianshou Zhou

Superior Title: PLoS Computational Biology, Vol 12, Iss 5, p e1004917 (2016)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4859557?pdf=render; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/1eefb9697f9b4bd187cd06408f4de5e6

Authors: Tianshou Zhou, Jiajun Zhang, Zhanjiang Yuan, Anlong Xu

Superior Title: PLoS ONE, Vol 2, Iss 2, p e231 (2007)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC1794152?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/22b25637df104789aa938cbae8c6a694

Authors: Huang Tianjin, Zhou Yu

Superior Title: Xin yixue, Vol 53, Iss 5, Pp 340-343 (2022)

Subject Terms: cps1 gene|tumor|structure|function, Medicine

Relation: https://www.xinyixue.cn/fileup/0253-9802/PDF/1655097849334-1739325662.pdf; https://doaj.org/toc/0253-9802; https://doaj.org/article/6329f58748b34bada460270ef76cafb0

Availability: https://doi.org/10.3969/j.issn.0253-9802.2022.05.008
https://doaj.org/article/6329f58748b34bada460270ef76cafb0

Authors: Zailiang, Zhu, Bozheng, Dou, Yukang, Cao, Jian, Jiang, Yueying, Zhu, Dong, Chen, Hongsong, Feng, Jie, Liu, Bengong, Zhang, Tianshou, Zhou, Guowei, Wei

Subject Terms: Quantitative Biology - Biomolecules

Relation: http://arxiv.org/abs/2212.01497

Availability: http://arxiv.org/abs/2212.01497

Authors: Songhao Luo, Zhenquan Zhang, Zihao Wang, Xiyan Yang, Xiaoxuan Chen, Tianshou Zhou, Jiajun Zhang

Subject Terms: Bioinformatics, Systems Biology, Computational Biology, inference, transcriptional bursting, single-cell snapshot, non-Markovian, gene expression

Relation: https://figshare.com/articles/journal_contribution/Supplementary_notes_supplementary_tables_and_supplementary_figures_from_Inferring_transcriptional_bursting_kinetics_from_single-cell_snapshot_data_using_a_generalized_telegraph_model/22337756

Availability: https://doi.org/10.6084/m9.figshare.22337756.v1
https://figshare.com/articles/journal_contribution/Supplementary_notes_supplementary_tables_and_supplementary_figures_from_Inferring_transcriptional_bursting_kinetics_from_single-cell_snapshot_data_using_a_generalized_telegraph_model/22337756