Authors: Zsuzsanna Lipták, Francesco Masillo, Simon J. Puglisi
Superior Title: Algorithms for Molecular Biology, Vol 19, Iss 1, Pp 1-18 (2024)
Subject Terms: Generalized suffix array, Matching statistics, String collections, Compressed representation, Data structures, Efficient algorithms, Biology (General), QH301-705.5, Genetics, QH426-470
File Description: electronic resource
Relation: https://doaj.org/toc/1748-7188
Authors: Martin D. Muggli, Simon J. Puglisi, Christina Boucher
Superior Title: Algorithms for Molecular Biology, Vol 14, Iss 1, Pp 1-13 (2019)
Subject Terms: Optical mapping, Index based data structures, FM-index, Graph algorithms, Biology (General), QH301-705.5, Genetics, QH426-470
File Description: electronic resource
Relation: https://doaj.org/toc/1748-7188
Superior Title: Algorithms, Vol 13, Iss 9, p 234 (2020)
Subject Terms: shortest unique substring, k-mismatch SUS, time-space tradeoff, Karp–Rabin, sketching, suffix trees, Industrial engineering. Management engineering, T55.4-60.8, Electronic computers. Computer science, QA75.5-76.95
File Description: electronic resource
Authors: Zsuzsanna Lipták, Simon J. Puglisi, Massimiliano Rossi
Contributors: Liptak, Zsuzsanna, Puglisi, Simon J., Massimiliano, Rossi
Subject Terms: property testing, suffix tree, pattern mining
File Description: STAMPA
Relation: ispartofbook:Proceedings of the 18th International Symposium on Experimental Algorithms, SEA 2020; INTERNATIONAL SYMPOSIUM ON EXPERIMENTAL ALGORITHMS; firstpage:1; lastpage:14; numberofpages:14; serie:LEIBNIZ INTERNATIONAL PROCEEDINGS IN INFORMATICS; http://hdl.handle.net/11562/1023387; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85088168067; https://drops.dagstuhl.de/opus/volltexte/2020/12086/pdf/LIPIcs-SEA-2020-12.pdf
Authors: Zsuzsanna Liptak, Francesco Masillo, Simon J. Puglisi
Contributors: Liptak, Zsuzsanna, Masillo, Francesco, Puglisi, Simon J.
Subject Terms: Generalized suffix array, matching statistics, string collections, compressed representation, data structures, efficient algorithms
File Description: STAMPA
Relation: ispartofbook:22nd International Workshop on Algorithms in Bioinformatics (WABI 2022); 22nd International Workshop on Algorithms in Bioinformatics (WABI 2022); volume:17054; firstpage:1; lastpage:15; numberofpages:15; serie:LEIBNIZ INTERNATIONAL PROCEEDINGS IN INFORMATICS; https://hdl.handle.net/11562/1091826; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85137784499; https://drops.dagstuhl.de/opus/volltexte/2022/17054/
Authors: Golnaz Badkobeh, Sara Giuliani, Zsuzsanna Liptak, Simon J. Puglisi
Contributors: Badkobeh, Golnaz, Giuliani, Sara, Liptak, Zsuzsanna, Puglisi:, Simon J.
Subject Terms: Lempel-Ziv, LZ77, data compression, strings, repetitiveness, combinatorics on words, parsing, short reads
Relation: ispartofbook:Proceedings of the 23rd Italian Conference on Theoretical Computer Science, ICTCS 2022; 23rd Italian Conference on Theoretical Computer Science, ICTCS 2022; volume:3284; firstpage:136; lastpage:147; numberofpages:12; serie:CEUR WORKSHOP PROCEEDINGS; https://hdl.handle.net/11562/1091828; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85143256484; https://ceur-ws.org/Vol-3284/1532.pdf
Authors: Travis Gagie, Gonzalo Navarro, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.cs.hut.fi/~travis/papers/tcs12.pdf.
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.592.1200; http://www.cs.hut.fi/~travis/papers/tcs12.pdf
Availability: http://www.cs.hut.fi/~travis/papers/tcs12.pdf
Authors: Travis Gagie, Yakov Nekrich, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.cs.hut.fi/~travis/papers/lata12.pdf.
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.592.2269; http://www.cs.hut.fi/~travis/papers/lata12.pdf
Availability: http://www.cs.hut.fi/~travis/papers/lata12.pdf
Authors: Travis Gagie, Juha Kärkkäinen, Gonzalo Navarro, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs12.3.pdf.
Subject Terms: Data structures, 1D range queries, Document retrieval, Wavelet trees, Information retrieval
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.259.6301; http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs12.3.pdf
Availability: http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs12.3.pdf
Authors: Travis Gagie, Gonzalo Navarro, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs11.2.pdf.
Subject Terms: Information retrieval, Document retrieval, Data structures, 1D range queries, Wavelet trees
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.228.8762; http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs11.2.pdf
Availability: http://www.dcc.uchile.cl/%7Egnavarro/ps/tcs11.2.pdf
Authors: Travis Gagie, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.cs.hut.fi/~travis/papers/isaac11.pdf.
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.592.1067; http://www.cs.hut.fi/~travis/papers/isaac11.pdf
Availability: http://www.cs.hut.fi/~travis/papers/isaac11.pdf
Authors: Gonzalo Navarro, Simon J. Puglisi, Andrew Turpin
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=424.
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.186.1405; http://www.seg.rmit.edu.au/research/download.php?manuscript=424
Authors: Travis Gagie, Simon J. Puglisi, Andrew Turpin
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://arxiv.org/pdf/0903.4726v5.pdf.
File Description: application/pdf
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.244.919; http://arxiv.org/pdf/0903.4726v5.pdf
Availability: http://arxiv.org/pdf/0903.4726v5.pdf
Authors: Yohannes Tsegay, Simon J. Puglisi, Andrew Turpin
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=240.
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.215.1393; http://www.seg.rmit.edu.au/research/download.php?manuscript=240
Authors: Juha Kärkkäinen, Giovanni Manzini, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=406.
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.186.2185; http://www.seg.rmit.edu.au/research/download.php?manuscript=406
Authors: Simon J. Puglisi, William F. Smyth, Munina Yusufu
Contributors: The Pennsylvania State University CiteSeerX Archives
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.673.6479; http://www.stringology.org/cgi-bin/getfile.cgi?c%3D-%26n%3D15%26t%3Dpdf%26y%3D2008
Authors: Michael A. Maniscalco, Simon J. Puglisi
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=328.
Subject Terms: Search and Retrieval, D.1.0 [Programming Techniques, General General Terms, Algorithms, Performance Additional Key Words and Phrases, Suffix sorting, Burrows–Wheeler transform, suffix array, suffix tree ACM Reference Format
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.184.56; http://www.seg.rmit.edu.au/research/download.php?manuscript=328
Authors: Ranjan Sinha, Simon J. Puglisi, Alistair Moffat, Andrew Turpin
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=247.
Subject Terms: suffix tree, suffix array, secondary storage, diskbased algorithm
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.183.9556; http://www.seg.rmit.edu.au/research/download.php?manuscript=247
Authors: Simon J. Puglisi, Jamie Simpson
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=324.
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.183.8758; http://www.seg.rmit.edu.au/research/download.php?manuscript=324
Authors: Simon J. Puglisi, Andrew Turpin
Contributors: The Pennsylvania State University CiteSeerX Archives
Superior Title: http://www.seg.rmit.edu.au/research/download.php?manuscript=246.
Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.183.8635; http://www.seg.rmit.edu.au/research/download.php?manuscript=246