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1
Academic Journal
What, how and who: Cost-effectiveness analyses of COVID-19 vaccination to inform key policies in Nigeria.

Authors: Ruiz, Francis J, Torres-Rueda, Sergio, Pearson, Carl AB, Bergren, Eleanor, Okeke, Chinyere, Procter, Simon R, Madriz-Montero, Andres, Jit, Mark, Vassall, Anna, Uzochukwu, Benjamin SC

Contributors: Robinson, Julia

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4669499/7/Ruiz-etal-2023-What-how-and-who-cost.pdf; Ruiz, Francis J ; Torres-Rueda, Sergio ; Pearson, Carl AB ; Bergren, Eleanor; Okeke, Chinyere; Procter, Simon R ; Madriz-Montero, Andres; Jit, Mark ; Vassall, Anna ; Uzochukwu, Benjamin SC; (2023) What, how and who: Cost-effectiveness analyses of COVID-19 vaccination to inform key policies in Nigeria. PLOS global public health, 3 (3). e0001693-. ISSN 2767-3375 DOI: https://doi.org/10.1371/journal.pgph.0001693

Availability: https://doi.org/10.1371/journal.pgph.0001693
https://researchonline.lshtm.ac.uk/id/eprint/4669499/
https://researchonline.lshtm.ac.uk/id/eprint/4669499/7/Ruiz-etal-2023-What-how-and-who-cost.pdf

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2
Academic Journal
Assessing the impacts of COVID-19 vaccination programme's timing and speed on health benefits, cost-effectiveness, and relative affordability in 27 African countries.

Authors: Liu, Yang, Procter, Simon R, Pearson, Carl AB, Montero, Andrés Madriz, Torres-Rueda, Sergio, Asfaw, Elias, Uzochukwu, Benjamin, Drake, Tom, Bergren, Eleanor, Eggo, Rosalind M, Ruiz, Francis, Ndembi, Nicaise, Nonvignon, Justice, Jit, Mark, Vassall, Anna

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4669171/1/Liu-etal-2023-assessing-the-impacts.pdf; Liu, Yang ; Procter, Simon R ; Pearson, Carl AB ; Montero, Andrés Madriz; Torres-Rueda, Sergio ; Asfaw, Elias; Uzochukwu, Benjamin; Drake, Tom; Bergren, Eleanor; Eggo, Rosalind M ; +5 more. Ruiz, Francis ; Ndembi, Nicaise; Nonvignon, Justice; Jit, Mark ; Vassall, Anna ; (2023) Assessing the impacts of COVID-19 vaccination programme's timing and speed on health benefits, cost-effectiveness, and relative affordability in 27 African countries. BMC medicine, 21 (1). 85-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-023-02784-z

Availability: https://doi.org/10.1186/s12916-023-02784-z
https://researchonline.lshtm.ac.uk/id/eprint/4669171/
https://researchonline.lshtm.ac.uk/id/eprint/4669171/1/Liu-etal-2023-assessing-the-impacts.pdf

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4
Academic Journal
Multiple models for outbreak decision support in the face of uncertainty.

Authors: Shea, Katriona, Borchering, Rebecca K, Probert, William JM, Howerton, Emily, Bogich, Tiffany L, Li, Shou-Li, van Panhuis, Willem G, Viboud, Cecile, Aguás, Ricardo, Belov, Artur A, Bhargava, Sanjana H, Cavany, Sean M, Chang, Joshua C, Chen, Cynthia, Chen, Jinghui, Chen, Shi, Chen, YangQuan, Childs, Lauren M, Chow, Carson C, Crooker, Isabel, Del Valle, Sara Y, España, Guido, Fairchild, Geoffrey, Gerkin, Richard C, Germann, Timothy C, Gu, Quanquan, Guan, Xiangyang, Guo, Lihong, Hart, Gregory R, Hladish, Thomas J, Hupert, Nathaniel, Janies, Daniel, Kerr, Cliff C, Klein, Daniel J, Klein, Eili Y, Lin, Gary, Manore, Carrie, Meyers, Lauren Ancel, Mittler, John E, Mu, Kunpeng, Núñez, Rafael C, Oidtman, Rachel J, Pasco, Remy, Pastore Y Piontti, Ana, Paul, Rajib, Pearson, Carl AB, Perdomo, Dianela R, Perkins, T Alex, Pierce, Kelly, Pillai, Alexander N, Rael, Rosalyn Cherie, Rosenfeld, Katherine, Ross, Chrysm Watson, Spencer, Julie A, Stoltzfus, Arlin B, Toh, Kok Ben, Vattikuti, Shashaank, Vespignani, Alessandro, Wang, Lingxiao, White, Lisa J, Xu, Pan, Yang, Yupeng, Yogurtcu, Osman N, Zhang, Weitong, Zhao, Yanting, Zou, Difan, Ferrari, Matthew J, Pannell, David, Tildesley, Michael J, Seifarth, Jack, Johnson, Elyse, Biggerstaff, Matthew, Johansson, Michael A, Slayton, Rachel B, Levander, John D, Stazer, Jeff, Kerr, Jessica, Runge, Michael C

Superior Title: Proceedings of the National Academy of Sciences of the United States of America, vol 120, iss 18

Subject Terms: Humans, Uncertainty, Public Health, Disease Outbreaks, Pandemics, COVID-19, cognitive biases, decision theory, multi-model aggregation, Prevention, Brain Disorders, Good Health and Well Being

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Relation: qt6ft0m4br; https://escholarship.org/uc/item/6ft0m4br

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5
Academic Journal
Dosing interval strategies for two-dose COVID-19 vaccination in 13 middle-income countries of Europe: Health impact modelling and benefit-risk analysis.

Authors: Liu, Yang, Pearson, Carl AB, Sandmann, Frank G, Barnard, Rosanna C, Kim, Jong-Hoon, CMMID COVID-19 Working Group, Flasche, Stefan, Jit, Mark, Abbas, Kaja

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4665231/1/1-s2.0-S2666776222000746-main.pdf; Liu, Yang ; Pearson, Carl AB ; Sandmann, Frank G; Barnard, Rosanna C ; Kim, Jong-Hoon; CMMID COVID-19 Working Group; Flasche, Stefan ; Jit, Mark ; Abbas, Kaja ; (2022) Dosing interval strategies for two-dose COVID-19 vaccination in 13 middle-income countries of Europe: Health impact modelling and benefit-risk analysis. The Lancet Regional Health - Europe, 17. 100381-. ISSN 2666-7762 DOI: https://doi.org/10.1016/j.lanepe.2022.100381

Availability: https://doi.org/10.1016/j.lanepe.2022.100381
https://researchonline.lshtm.ac.uk/id/eprint/4665231/
https://researchonline.lshtm.ac.uk/id/eprint/4665231/1/1-s2.0-S2666776222000746-main.pdf


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6
Academic Journal
Transmission dynamics of SARS-CoV-2 in a strictly-Orthodox Jewish community in the UK.

Authors: Waites, William, Pearson, Carl AB, Gaskell, Katherine M, House, Thomas, Pellis, Lorenzo, Johnson, Marina, Gould, Victoria, Hunt, Adam, Stone, Neil RH, Kasstan, Ben, Chantler, Tracey, Lal, Sham, Roberts, Chrissy H, Goldblatt, David, CMMID COVID-19 Working Group, Marks, Michael, Eggo, Rosalind M

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4666911/7/Waites_etal_2022_Transmission-dynamics-of-sars-cov.pdf; Waites, William; Pearson, Carl AB; Gaskell, Katherine M ; House, Thomas; Pellis, Lorenzo; Johnson, Marina; Gould, Victoria; Hunt, Adam; Stone, Neil RH; Kasstan, Ben ; +7 more. Chantler, Tracey ; Lal, Sham ; Roberts, Chrissy H ; Goldblatt, David; CMMID COVID-19 Working Group; Marks, Michael ; Eggo, Rosalind M ; (2022) Transmission dynamics of SARS-CoV-2 in a strictly-Orthodox Jewish community in the UK. Scientific Reports, 12 (1). 8550-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-022-12517-6

Availability: https://doi.org/10.1038/s41598-022-12517-6
https://researchonline.lshtm.ac.uk/id/eprint/4666911/
https://researchonline.lshtm.ac.uk/id/eprint/4666911/7/Waites_etal_2022_Transmission-dynamics-of-sars-cov.pdf


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7
Academic Journal
Optimising health and economic impacts of COVID-19 vaccine prioritisation strategies in the WHO European Region: a mathematical modelling study.

Authors: Liu, Yang, Sandmann, Frank G, Barnard, Rosanna C, Pearson, Carl AB, Pastore, Roberta, Pebody, Richard, Flasche, Stefan, Jit, Mark

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4664135/1/1-s2.0-S2666776221002532-main.pdf; Liu, Yang ; Sandmann, Frank G; Barnard, Rosanna C ; Pearson, Carl AB ; Pastore, Roberta; Pebody, Richard; Flasche, Stefan ; Jit, Mark ; (2022) Optimising health and economic impacts of COVID-19 vaccine prioritisation strategies in the WHO European Region: a mathematical modelling study. The Lancet regional health. Europe, 12. 100267-. ISSN 2666-7762 DOI: https://doi.org/10.1016/j.lanepe.2021.100267

Availability: https://doi.org/10.1016/j.lanepe.2021.100267
https://researchonline.lshtm.ac.uk/id/eprint/4664135/
https://researchonline.lshtm.ac.uk/id/eprint/4664135/1/1-s2.0-S2666776221002532-main.pdf


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8
Academic Journal
The importance of saturating density dependence for population-level predictions of SARS-CoV-2 resurgence compared with density-independent or linearly density-dependent models, England, 23 March to 31 July 2020

Authors: Nightingale, Emily S, Brady, Oliver J, Yakob, Laith, Gimma, Amy, Jit, Mark, Jarvis, Christopher I, Waterlow, Naomi R, Procter, Simon R, Auzenbergs, Megan, Tully, Damien C, Simons, David, Endo, Akira, Hellewell, Joel, Lowe, Rachel, Foss, Anna M, van Zandvoort, Kevin, Pearson, Carl AB, Showering, Alicia, Klepac, Petra, Medley, Graham, Quilty, Billy J, Diamond, Charlie, Edmunds, W John, Rosello, Alicia, Barnard, Rosanna C, Abbas, Kaja, Sherratt, Katharine, Williams, Jack, Meakin, Sophie R, Quaife, Matthew, Russell, Timothy W, Villabona-Arenas, C Julian, Prem, Kiesha, Sun, Fiona Yueqian, Davies, Nicholas G, Eggo, Rosalind M, Knight, Gwenan M, Kucharski, Adam J, Sandmann, Frank G, Funk, Sebastian, Gore-Langton, Georgia R, Flasche, Stefan, Jombart, Thibaut, Gibbs, Hamish P, Liu, Yang, Brady, Oliver, Bosse, Nikos I, Chan, Yung-Wai Desmond, Abbott, Sam, Clifford, Samuel, Atkins, Katherine E, Munday, James D

Superior Title: Euro Surveill

Subject Terms: Research

Relation: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8662798/; http://www.ncbi.nlm.nih.gov/pubmed/34886944; http://dx.doi.org/10.2807/1560-7917.ES.2021.26.49.2001809

Availability: https://doi.org/10.2807/1560-7917.ES.2021.26.49.2001809
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8662798/
http://www.ncbi.nlm.nih.gov/pubmed/34886944

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9
Academic Journal
Strategies to reduce the risk of SARS-CoV-2 importation from international travellers: modelling estimations for the United Kingdom, July 2020.

Authors: Clifford, Samuel, Quilty, Billy J, Russell, Timothy W, Liu, Yang, Chan, Yung-Wai D, Pearson, Carl AB, Eggo, Rosalind M, Endo, Akira, CMMID COVID-19 Working Group, Flasche, Stefan, Edmunds, W John, Centre for Mathematical Modelling of Infectious Diseases (CMMID)

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4663625/1/Strategies%20to%20reduce%20the%20risk%20of%20SARS-CoV-2%20importation%20from%20international%20travellers%20modelling%20estimations%20for%20the%20United%20K.pdf; Clifford, Samuel ; Quilty, Billy J ; Russell, Timothy W ; Liu, Yang ; Chan, Yung-Wai D ; Pearson, Carl AB ; Eggo, Rosalind M ; Endo, Akira; CMMID COVID-19 Working Group; Flasche, Stefan ; +2 more. Edmunds, W John ; Centre for Mathematical Modelling of Infectious Diseases (CMMID); CMMID COVID-19 Working Group, Centre for Mathematical Modelling of Infectious Diseases (CMMID); (2021) Strategies to reduce the risk of SARS-CoV-2 importation from international travellers: modelling estimations for the United Kingdom, July 2020. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 26 (39). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2021.26.39.2001440

Availability: https://doi.org/10.2807/1560-7917.ES.2021.26.39.2001440
https://researchonline.lshtm.ac.uk/id/eprint/4663625/
https://researchonline.lshtm.ac.uk/id/eprint/4663625/1/Strategies%20to%20reduce%20the%20risk%20of%20SARS-CoV-2%20importation%20from%20international%20travellers%20modelling%20estimations%20for%20the%20United%20K.pdf


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10
Academic Journal
Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England.

Authors: Munday, James D, Sherratt, Katharine, Meakin, Sophie, Endo, Akira, Pearson, Carl AB, Hellewell, Joel, Abbott, Sam, Bosse, Nikos I, CMMID COVID-19 Working Group, Atkins, Katherine E, Wallinga, Jacco, Edmunds, W John, van Hoek, Albert Jan, Funk, Sebastian

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4661292/1/s41467-021-22213-0.pdf; Munday, James D; Sherratt, Katharine ; Meakin, Sophie ; Endo, Akira ; Pearson, Carl AB ; Hellewell, Joel ; Abbott, Sam ; Bosse, Nikos I ; CMMID COVID-19 Working Group; Atkins, Katherine E ; +4 more. Wallinga, Jacco; Edmunds, W John ; van Hoek, Albert Jan; Funk, Sebastian ; (2021) Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England. Nature communications, 12 (1). 1942-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-021-22213-0

Availability: https://doi.org/10.1038/s41467-021-22213-0
https://researchonline.lshtm.ac.uk/id/eprint/4661292/
https://researchonline.lshtm.ac.uk/id/eprint/4661292/1/s41467-021-22213-0.pdf


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11
Academic Journal
COVID-19 vaccination in Sindh Province, Pakistan: A modelling study of health impact and cost-effectiveness.

Authors: Pearson, Carl AB, Bozzani, Fiammetta, Procter, Simon R, Davies, Nicholas G, Huda, Maryam, Jensen, Henning Tarp, Keogh-Brown, Marcus, Khalid, Muhammad, Sweeney, Sedona, Torres-Rueda, Sergio, CHiL COVID-19 Working Group, CMMID COVID-19 Working Group, Eggo, Rosalind M, Vassall, Anna, Jit, Mark

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4663500/1/COVID-19%20vaccination%20in%20Sindh%20Province,%20Pakistan%20A%20modelling%20study%20of%20health%20impact%20and%20cost-effectiveness.pdf; Pearson, Carl AB ; Bozzani, Fiammetta ; Procter, Simon R ; Davies, Nicholas G ; Huda, Maryam; Jensen, Henning Tarp ; Keogh-Brown, Marcus ; Khalid, Muhammad; Sweeney, Sedona ; Torres-Rueda, Sergio ; +5 more. CHiL COVID-19 Working Group; CMMID COVID-19 Working Group; Eggo, Rosalind M ; Vassall, Anna ; Jit, Mark ; CHiL COVID-19 Working Group, CMMID COVID-19 Working Group; (2021) COVID-19 vaccination in Sindh Province, Pakistan: A modelling study of health impact and cost-effectiveness. PLoS medicine, 18 (10). e1003815-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1003815

Availability: https://doi.org/10.1371/journal.pmed.1003815
https://researchonline.lshtm.ac.uk/id/eprint/4663500/
https://researchonline.lshtm.ac.uk/id/eprint/4663500/1/COVID-19%20vaccination%20in%20Sindh%20Province,%20Pakistan%20A%20modelling%20study%20of%20health%20impact%20and%20cost-effectiveness.pdf


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13
Academic Journal
Potential test-negative design study bias in outbreak settings: application to Ebola vaccination in Democratic Republic of Congo.

Authors: Pearson, Carl AB, Edmunds, W John, Hladish, Thomas J, Eggo, Rosalind M

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4663074/1/dyab172.pdf; Pearson, Carl AB ; Edmunds, W John ; Hladish, Thomas J; Eggo, Rosalind M; (2021) Potential test-negative design study bias in outbreak settings: application to Ebola vaccination in Democratic Republic of Congo. International journal of epidemiology, 51 (1). pp. 265-278. ISSN 0300-5771 DOI: https://doi.org/10.1093/ije/dyab172

Availability: https://doi.org/10.1093/ije/dyab172
https://researchonline.lshtm.ac.uk/id/eprint/4663074/
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16
Academic Journal
Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England.

Authors: Davies, Nicholas G, Abbott, Sam, Barnard, Rosanna C, Jarvis, Christopher I, Kucharski, Adam J, Munday, James D, Pearson, Carl AB, Russell, Timothy W, Tully, Damien C, Washburne, Alex D, Wenseleers, Tom, Gimma, Amy, Waites, William, Wong, Kerry LM, van Zandvoort, Kevin, Silverman, Justin D, CMMID COVID-19 Working Group, COVID-19 Genomics UK (COG-UK) Consortium, Diaz-Ordaz, Karla, Keogh, Ruth, Eggo, Rosalind M, Funk, Sebastian, Jit, Mark, Atkins, Katherine E, Edmunds, W John

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4660379/1/preprint.pdf; Davies, Nicholas G ; Abbott, Sam ; Barnard, Rosanna C ; Jarvis, Christopher I ; Kucharski, Adam J ; Munday, James D; Pearson, Carl AB ; Russell, Timothy W ; Tully, Damien C ; Washburne, Alex D; +15 more. Wenseleers, Tom; Gimma, Amy; Waites, William ; Wong, Kerry LM ; van Zandvoort, Kevin ; Silverman, Justin D; CMMID COVID-19 Working Group; COVID-19 Genomics UK (COG-UK) Consortium; Diaz-Ordaz, Karla ; Keogh, Ruth ; Eggo, Rosalind M ; Funk, Sebastian ; Jit, Mark ; Atkins, Katherine E ; Edmunds, W John ; (2021) Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. Science (New York, N.Y.), 372 (6538). 149-+. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.abg3055

Availability: https://doi.org/10.1126/science.abg3055
https://researchonline.lshtm.ac.uk/id/eprint/4660379/
https://researchonline.lshtm.ac.uk/id/eprint/4660379/1/preprint.pdf


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18
Academic Journal
Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study.

Authors: van Zandvoort, Kevin, Jarvis, Christopher I, Pearson, Carl AB, Davies, Nicholas G, CMMID COVID-19 working group, Ratnayake, Ruwan, Russell, Timothy W, Kucharski, Adam J, Jit, Mark, Flasche, Stefan, Eggo, Rosalind M, Checchi, Francesco

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Relation: https://researchonline.lshtm.ac.uk/id/eprint/4665058/7/vanZandvoort_etal_2020_Response-strategies-for-covid-19.pdf; van Zandvoort, Kevin ; Jarvis, Christopher I ; Pearson, Carl AB ; Davies, Nicholas G ; CMMID COVID-19 working group; Ratnayake, Ruwan ; Russell, Timothy W ; Kucharski, Adam J ; Jit, Mark ; Flasche, Stefan ; +2 more. Eggo, Rosalind M ; Checchi, Francesco ; (2020) Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study. BMC Medicine, 18 (1). 324-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-020-01789-2

Availability: https://doi.org/10.1186/s12916-020-01789-2
https://researchonline.lshtm.ac.uk/id/eprint/4665058/
https://researchonline.lshtm.ac.uk/id/eprint/4665058/7/vanZandvoort_etal_2020_Response-strategies-for-covid-19.pdf


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