Authors: Wang, Peng, Xiao, Xiang, Wang, Fengping
Superior Title: Extremophiles: Life Under Extreme Conditions. June 2005 9(3):209-217
Subject Terms: Archaea, targed with ARCH915 oligonucleotide FISH-probe, ARK-XXX/1.2, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD/Rosette with Underwater Vision Profiler, CTD-RO, CTD-RO_UVP, Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes, DEPTH, water, EG_I, EG_IV, Event label, Fluorescence determination of DAPI stain, Fram Strait, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, HG_I
Subject Geographic: MEDIAN LATITUDE: 79.228867 * MEDIAN LONGITUDE: 2.785411 * SOUTH-BOUND LATITUDE: 78.816000 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 79.921170 * EAST-BOUND LONGITUDE: 6.088500 * DATE/TIME START: 2016-06-26T04:57:00 * DATE/TIME END: 2016-07-10T02:23:00 * MINIMUM DEPTH, water: 13 m * MAXIMUM DEPTH, water: 5500 m
File Description: text/tab-separated-values, 748 data points
Relation: Oligonucleotide probes and formamide concentration s in LTER-HAUSGARTEN and adjacent stations in Fram Strait (URI: https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf); Pala, Claudia; Bienhold, Christina; Boetius, Antje; Salman-Carvalho, Verena (2019): CARD-FISH cell counts of Bacteria and Archaea in sediments of HAUSGARTEN, Fram Strait, from Polarstern cruise PS85. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.905210; Salman-Carvalho, Verena (2019): CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait. PANGAEA, https://doi.org/10.1594/PANGAEA.903569; https://doi.pangaea.de/10.1594/PANGAEA.905212; https://doi.org/10.1594/PANGAEA.905212
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB15703-4, Maria S. Merian, MSM18/1, Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe, Synechococcus, targeted with SYN405 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.751667 * LONGITUDE: -18.736667 * DATE/TIME START: 2011-04-29T13:38:00 * DATE/TIME END: 2011-04-29T13:38:00 * MINIMUM DEPTH, water: 53 m * MAXIMUM DEPTH, water: 2600 m
Time: 603
File Description: text/tab-separated-values, 180 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889461; https://doi.org/10.1594/PANGAEA.889461
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB15709-3, Maria S. Merian, MSM18/1, Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe, Synechococcus, targeted with SYN405 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 21.252500 * LONGITUDE: -20.817000 * DATE/TIME START: 2011-05-03T23:47:00 * DATE/TIME END: 2011-05-03T23:47:00 * MINIMUM DEPTH, water: 60 m * MAXIMUM DEPTH, water: 4100 m
Time: 610
File Description: text/tab-separated-values, 180 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889463; https://doi.org/10.1594/PANGAEA.889463
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14209-2, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.499660 * LONGITUDE: -17.732500 * DATE/TIME START: 2010-03-05T07:29:00 * DATE/TIME END: 2010-03-05T07:29:00 * MINIMUM DEPTH, water: 15 m * MAXIMUM DEPTH, water: 250 m
Time: 22-10
File Description: text/tab-separated-values, 96 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889460; https://doi.org/10.1594/PANGAEA.889460
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14207-1, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.583160 * LONGITUDE: -17.999830 * DATE/TIME START: 2010-03-03T12:41:00 * DATE/TIME END: 2010-03-03T12:41:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 700 m
Time: 22-10
File Description: text/tab-separated-values, 116 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889459; https://doi.org/10.1594/PANGAEA.889459
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14204-3, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 19.166830 * LONGITUDE: -20.999830 * DATE/TIME START: 2010-03-01T16:21:00 * DATE/TIME END: 2010-03-01T16:21:00 * MINIMUM DEPTH, water: 65.00 m * MAXIMUM DEPTH, water: 1000.00 m
Time: 22-10
File Description: text/tab-separated-values, 93 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889458; https://doi.org/10.1594/PANGAEA.889458
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14202-6, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.743330 * LONGITUDE: -18.717330 * DATE/TIME START: 2010-02-27T18:02:00 * DATE/TIME END: 2010-02-27T18:02:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 2650 m
Time: 22-10
File Description: text/tab-separated-values, 129 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889457; https://doi.org/10.1594/PANGAEA.889457
Authors: Fuchs, Bernhard M, Bennke, Christin M, Reintjes, Greta, Kassabgy, Mariette, Amann, Rudolf I
Subject Terms: Actinobacteria, targeted with HGC69a oligonucleotides FISH-probe, Alphaproteobacteria, targeted with ALF968 oligonucleotides FISH-probe, Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Archaea, targed with ARCH915 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacterioplankton, Balneatrix, targeted with Bal731 oligonucleotides FISH-probe, Betaproteobacteria, targeted with BET42a oligonucleotides FISH-probe, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, Cytophaga-Flavobacterium cluster, targeted with CF319a oligonucleotide FISH-probe, DATE/TIME, DEPTH, water, Epifluorescence microscopy after DAPI staining, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Formosa, targeted with FORM181A oligonucleotides FISH-probe, targeted with FORM181B oligonucleotides FISH-probe, Gammaproteobacteria
Subject Geographic: LATITUDE: 54.188330 * LONGITUDE: 7.900000 * DATE/TIME START: 2009-01-05T00:00:00 * DATE/TIME END: 2012-06-20T00:00:00 * MINIMUM DEPTH, water: 0.5 m * MAXIMUM DEPTH, water: 0.5 m
File Description: text/tab-separated-values, 5239 data points
Relation: Krüger, Karen; Francis, T Ben; Chafee, Meghan; Amann, Rudolf I; Glavina del Rio, Tijana; Teeling, Hanno (2019): North Sea spring phytoplankton bloom metagenome assemblies and metagenome assembled genomes (MAGs). European Nucleotide Archive (ENA), insdc:PRJEB28156; Teeling, Hanno; Fuchs, Bernhard M; Becher, Dieter; Klockow, C; Gardebrecht, A; Bennke, Christin M; Kassabgy, Mariette; Huang, S; Waldmann, Jost; Weber, M; Klindworth, A; Otto, Andreas; Lange, J; Bernhardt, J; Reinsch, C; Hecker, M; Peplies, J; Bockelmann, Frank Detlef; Callies, U; Gerdts, Gunnar; Wichels, Antje; Wiltshire, Karen Helen; Glöckner, Frank Oliver; Schweder, Thomas (2012): Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom. Science, 336(6081), 608-611, https://doi.org/10.1126/science.1218344; Teeling, Hanno; Fuchs, Bernhard M; Bennke, Christin M; Krüger, Karen; Chafee, Meghan; Kappelmann, Lennart; Reintjes, Greta; Waldmann, Jost; Quast, Christian; Glöckner, Frank Oliver; Lucas, Judith; Wichels, Antje; Gerdts, Gunnar; Wiltshire, Karen Helen; Amann, Rudolf I (2016): Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms. eLife Sciences Publications Ltd., 1-29, https://doi.org/10.7554/eLife.11888; Wiltshire, Karen Helen (2010): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2009. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.737388; Wiltshire, Karen Helen (2010): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2009. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.736644; Wiltshire, Karen Helen (2011): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2010. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.756613; Wiltshire, Karen Helen (2012): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2010. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.783570; Wiltshire, Karen Helen (2012): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2011. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.783571; Wiltshire, Karen Helen (2013): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2011. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.820157; Wiltshire, Karen Helen (2013): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2012. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.810745; Wiltshire, Karen Helen (2013): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2012. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.820206; Oligonucleotide probes and formamide concentration used in Teeling et al., 2012 (URI: https://store.pangaea.de/Publications/Teeling-etal_2012/Oligonucleotide-probes_Teeling-etal_2012.pdf); Oligonucleotide probes and formamide concentration used in Teeling et al., 2016 (URI: https://store.pangaea.de/Publications/Teeling-etal_2016/Oligonucleotide-probes_Teeling-etal_2016.pdf); https://doi.pangaea.de/10.1594/PANGAEA.860256; https://doi.org/10.1594/PANGAEA.860256
Availability:
https://doi.org/10.1594/PANGAEA.860256
https://doi.org/10.1126/science.1218344
https://doi.org/10.7554/eLife.11888
https://doi.org/10.1594/PANGAEA.737388
https://doi.org/10.1594/PANGAEA.736644
https://doi.org/10.1594/PANGAEA.756613
https://doi.org/10.1594/PANGAEA.783570
https://doi.org/10.1594/PANGAEA.783571
https://doi.org/10.1594/PANGAEA.820157
https://doi.org/10.1594/PANGAEA.810745
Authors: La Cono, Violetta, Tamburini, Christian, Genovese, Lucrezia, La Spada, Gina, Denaro, Renata, Yakimov, Michail M.
Contributors: Istituto per l'Ambiente Marino Costiero (CNR), National Research Council of Italy, Laboratoire de MicrobiologiE de Géochimie et d'Ecologie Marines (LMGEM), Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS)
Superior Title: ISSN: 0967-0645.
Subject Terms: Phylogeny, Deep Tyrrhenian Sea, 16S rRNA, Crenarchaeota Marine Group I, Euryarchaeota Marine Group II, [SDU.OCEAN]Sciences of the Universe [physics]/Ocean, Atmosphere
Relation: hal-00416669; https://hal.science/hal-00416669