Authors: Palagi, Patricia M.¹ (AUTHOR), Schwartz, Russell² (AUTHOR), Markel, Scott³ (AUTHOR), Ouellette, B. F. Francis⁴ (AUTHOR) francis.ouellette@gmail.com

Superior Title: PLoS Computational Biology. 12/21/2023, Vol. 19 Issue 12, p1-6. 6p.

Subject Terms: *COMPUTATIONAL biology, *HEBBIAN memory, *COLLECTIONS

Authors: Debnath, Sandip¹ (AUTHOR) sandip.debnath@visva-bharati.ac.in, Alqahtani, Taha² (AUTHOR), Alqahtani, Ali² (AUTHOR), Alharbi, Hanan M.³ (AUTHOR), Akash, Shopnil⁴ (AUTHOR) sandip.debnath@visva-bharati.ac.in

Superior Title: PLoS ONE. 11/8/2023, Vol. 18 Issue 11, p1-15. 15p.

Subject Terms: *COMPUTATIONAL biology, *EUPHORBIA, *TOMATOES, *PLANT breeding, *DROUGHT tolerance, *TOMATO breeding, *PROTEOMICS, *PLANT hormones

Authors: Eltager, Mostafa¹ (AUTHOR), Abdelaal, Tamim^1,2 (AUTHOR), Charrout, Mohammed¹ (AUTHOR), Mahfouz, Ahmed^1,3,4 (AUTHOR), Reinders, Marcel J. T.^1,3,4 (AUTHOR), Makrodimitris, Stavros^1,5 (AUTHOR) s.makrodimitris@erasmusmc.nl

Superior Title: PLoS ONE. 10/5/2023, Vol. 18 Issue 10, p1-22. 22p.

Subject Terms: *COMPLEX manifolds, *COMPUTATIONAL biology, *TASK performance, *PROBABILISTIC generative models, *SURVIVAL analysis (Biometry), *GENERALIZATION

Authors: ROSCOE, SARAH¹ sroscoe@huskers.unl.edu, KHATRI, MINAL¹ khatri.cs16@gmail.com, VOSHALL, ADAM¹, BATRA, SURINDER² s-avoshal1@huskers.unl.edu, KAUR, SUKHWINDER² sbatra@unmc.edu, DEOGUN, JITENDER¹ deogun@cse.unl.edu

Superior Title: ACM Computing Surveys. Aug2023, Vol. 55 Issue 8, p1-40. 40p.

Subject Terms: COMPUTATIONAL biology, DEEP learning, NUCLEOTIDE sequencing, DRUG design, PROTEIN-protein interactions, BIOINFORMATICS, ONTOLOGIES (Information retrieval)

Authors: Miranda, Jamilet¹ (AUTHOR) jamilet.miranda@cigb.edu.cu, Vázquez-Blomquist, Dania² (AUTHOR) dania.vazquez@cigb.edu.cu, Bringas, Ricardo¹ (AUTHOR), Fernandez-de-Cossio, Jorge¹ (AUTHOR), Palenzuela, Daniel² (AUTHOR), Novoa, Lidia I.² (AUTHOR), Bello-Rivero, Iraldo³ (AUTHOR)

Superior Title: BMC Cancer. 8/29/2023, Vol. 23 Issue 1, p1-19. 19p.

Subject Terms: *INTERFERON gamma, *COMPUTATIONAL biology, *GENE expression profiling, *P53 antioncogene, *CELL lines, *CELL cycle, *GENE ontology

Authors: Lubiana, Tiago¹ (AUTHOR) tiago.lubiana.alves@usp.br, Lopes, Rafael² (AUTHOR), Medeiros, Pedro³ (AUTHOR), Silva, Juan Carlo¹ (AUTHOR), Goncalves, Andre Nicolau Aquime⁴ (AUTHOR), Maracaja-Coutinho, Vinicius^5,6,7,8,9 (AUTHOR), Nakaya, Helder I.^1,10 (AUTHOR) tiago.lubiana.alves@usp.br

Superior Title: PLoS Computational Biology. 8/10/2023, Vol. 19 Issue 9, p1-9. 9p. 1 Diagram.

Subject Terms: *CHATGPT, *COMPUTATIONAL biology, *SYNTHETIC biology, *LANGUAGE models, *SOFTWARE refactoring, *LIFE sciences

Authors: Marku, Malvina¹ (AUTHOR) malvina.marku@inserm.fr, Pancaldi, Vera^1,2 (AUTHOR) malvina.marku@inserm.fr

Superior Title: PLoS Computational Biology. 8/10/2023, Vol. 19 Issue 9, p1-26. 26p. 4 Diagrams, 2 Charts.

Subject Terms: *GENE regulatory networks, *COMPUTATIONAL biology, *BIOLOGICAL systems

Authors: Chindelevitch, Leonid¹ (AUTHOR) l.chindelevitch@imperial.ac.uk, van Dongen, Maarten² (AUTHOR), Graz, Heather³ (AUTHOR), Pedrotta, Antonio⁴ (AUTHOR), Suresh, Anita⁴ (AUTHOR), Uplekar, Swapna⁴ (AUTHOR), Jauneikaite, Elita^1,5 (AUTHOR), Wheeler, Nicole⁶ (AUTHOR)

Superior Title: PLoS Computational Biology. 6/22/2023, Vol. 19 Issue 6, p1-9. 9p. 1 Graph.

Subject Terms: *DRUG resistance in microorganisms, *COMPUTATIONAL biology, *MACHINE learning, *PHENOTYPES, *MICROBIAL sensitivity tests, *NUCLEOTIDE sequencing

Authors: Bharadwaj, Alok¹ (AUTHOR) alok.bhardwaj@gla.ac.in, Gupta, Mansi¹ (AUTHOR), Shakya, Akanksha¹ (AUTHOR)

Superior Title: Advancements of Microbiology. Jun2023, Vol. 62 Issue 2, p65-74. 10p.

Subject Terms: *MACHINE learning, *COMPUTATIONAL biology, *MICROBIAL ecology, *MICROBIAL communities, *NUCLEOTIDE sequencing, *SYNTHETIC biology

Authors: Tuna, Rukiye¹ (AUTHOR) rtuna@eng.famu.fsu.edu, Yi, Wenjuan¹ (AUTHOR) eec19f@fsu.edu, Crespo Cruz, Esmeralda¹ (AUTHOR) leo.liu@eng.famu.fsu.edu, Romero, JP¹ (AUTHOR), Ren, Yi² (AUTHOR), Guan, Jingjiao^1,3 (AUTHOR), Li, Yan^1,3 (AUTHOR), Deng, Yuefan⁴ (AUTHOR), Bluestein, Danny⁵ (AUTHOR) danny.bluestein@stonybrook.edu, Liu, Zixiang Leonardo^1,3 (AUTHOR), Sheriff, Jawaad⁵ (AUTHOR) jawaad.sheriff@stonybrook.edu

Superior Title: International Journal of Molecular Sciences. May2024, Vol. 25 Issue 9, p4800. 17p.

Subject Terms: *RHEOLOGY (Biology), *COMPUTATIONAL biology, *BLOOD platelet activation, *HEMOSTASIS, *BLOOD platelets, *BLOOD platelet aggregation

Authors: Bhardwaj, Vinay¹ (AUTHOR) bhard.vinay@gmail.com, Handler, Marc Zachary² (AUTHOR), Mao, Junhong¹ (AUTHOR), Azadegan, Chloe^1,3 (AUTHOR), Panda, Pritam K.^4,5 (AUTHOR), Breunig, Hans Georg⁶ (AUTHOR), Wenskus, Isabell⁶ (AUTHOR), Diaz, Isabel² (AUTHOR), König, Karsten^6,7 (AUTHOR)

Superior Title: Experimental Dermatology. Apr2024, Vol. 33 Issue 4, p1-13. 13p.

Subject Terms: *COMPUTATIONAL biology, *CHEMICAL peel, *HYPERPIGMENTATION, *CONFOCAL microscopy, *BIOPSY, *PHENOL oxidase

Authors: Goñi-Moreno, Ángel

Superior Title: Communications of the ACM; Jun2024, Vol. 67 Issue 6, p70-77, 8p

Subject Terms: SYNTHETIC biology, BIOLOGICALLY inspired computing, COMPUTER science, BOOLEAN functions, COMPUTATIONAL biology, MOLECULAR computers, DNA

Authors: Mac Gabhann, Feilim¹ (AUTHOR) feilim@jhu.edu, Pitzer, Virginia E.² (AUTHOR), Papin, Jason A.³ (AUTHOR)

Superior Title: PLoS Computational Biology. 8/17/2023, Vol. 19 Issue 8, p1-3. 3p. 1 Graph.

Subject Terms: *COMPUTATIONAL biology, *COMPUTER software, *DEEP learning, *BACTERIAL genomes, *SHARED housing, *FEATURE selection

Authors: Marchetti, Laura¹ (AUTHOR), Nifosì, Riccardo² (AUTHOR), Martelli, Pier Luigi³ (AUTHOR) pierluigi.martelli@unibo.it, Pozzo, Eleonora Da¹ (AUTHOR), Cappello, Valentina⁴ (AUTHOR), Banterle, Francesco⁵ (AUTHOR), Trincavelli, Maria Letizia¹ (AUTHOR), Martini, Claudia¹ (AUTHOR) pierluigi.martelli@unibo.it, D'Elia, Massimo^6,7 (AUTHOR)

Superior Title: Briefings in Bioinformatics. Nov2022, Vol. 23 Issue 6, p1-15. 15p.

Subject Terms: *QUANTUM computing, *ALGORITHMS, COMPUTATIONAL biology, PROTEIN structure prediction, METABOLOMICS, BIOCOMPLEXITY

Authors: Khalily, Melek P.¹ (AUTHOR) melek.parlak@yobu.edu.tr, Soydan, Medine² (AUTHOR)

Superior Title: Chemical Biology & Drug Design. Mar2023, Vol. 101 Issue 3, p772-793. 22p.

Subject Terms: *COMPUTATIONAL biology, *PEPTIDES, *CLINICAL indications, *PEPTIDE drugs, *CHEMICAL biology, *CHEMICAL synthesis

Authors: Noble, William Stafford^1,2 (AUTHOR) william-noble@uw.edu

Superior Title: PLoS Computational Biology. 1/5/2023, Vol. 19 Issue 1, p1-4. 4p.

Subject Terms: *COMPUTATIONAL biology, *RECEIVER operating characteristic curves

Authors: Farag, Romany M.¹ blackfox2100@gmail.com, Shams, Mahmoud Y.² mahmoud.yasin@ai.kfs.edu.eg, Aldawody, Dalia A.¹ drdaliaawad@yahoo.com, Khalid, Huda E.³ dr.huda-ismael@uotelafer.edu.iq, El-Bakry, Hazem M.⁴ elbakry@mans.edu.eg, Salama, Ahmed A.⁵ drsalama44@gmail.com

Superior Title: Neutrosophic Sets & Systems. 2024, Vol. 66, p34-54. 21p.

Subject Terms: *COMPUTATIONAL biology, *ARTIFICIAL intelligence, *BIOINFORMATICS, *DATA mining, *DATABASES, *BIOINFORMATICS software, *SYNTHETIC biology

Authors: Niarakis, Anna^1,2 (AUTHOR) anna.niaraki@univ-evry.fr, Waltemath, Dagmar³ (AUTHOR), Glazier, James⁴ (AUTHOR), Schreiber, Falk^5,6 (AUTHOR), Keating, Sarah M⁷ (AUTHOR), Nickerson, David⁸ (AUTHOR), Chaouiya, Claudine⁹ (AUTHOR), Siegel, Anne¹⁰ (AUTHOR), Noël, Vincent^11,12,13 (AUTHOR), Hermjakob, Henning¹⁴ (AUTHOR), Helikar, Tomáš¹⁵ (AUTHOR), Soliman, Sylvain² (AUTHOR), Calzone, Laurence^11,12,13 (AUTHOR)

Superior Title: Briefings in Bioinformatics. Jul2022, Vol. 23 Issue 4, p1-11. 11p.

Subject Terms: SYSTEMS biology, COMPUTATIONAL biology

Authors: Li, Hui¹ (AUTHOR), McCarthy, Davis J.^1,2,3 (AUTHOR), Shim, Heejung^1,3 (AUTHOR), Wei, Susan¹ (AUTHOR) susan.wei@unimelb.edu.au

Superior Title: BMC Bioinformatics. 11/3/2022, Vol. 23 Issue 1, p1-22. 22p.

Subject Terms: *BIOLOGICAL variation, *COMPUTATIONAL biology, *MATHEMATICAL optimization, *RNA sequencing, *CARCINOGENESIS

Authors: Ayoob, Joseph C.¹ (AUTHOR) jayoob@pitt.edu, Ramírez-Lugo, Juan S.² (AUTHOR)

Superior Title: PLoS Computational Biology. 11/3/2022, Vol. 18 Issue 11, p1-10. 10p. 1 Diagram.

Subject Terms: *COMPUTATIONAL biology, *RESEARCH skills, *BIOLOGISTS, *SUMMER