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Microbial community composition and bacterioplankton at time series station Helgoland Roads, North Sea

Authors: Fuchs, Bernhard M, Bennke, Christin M, Reintjes, Greta, Kassabgy, Mariette, Amann, Rudolf I

Subject Terms: Actinobacteria, targeted with HGC69a oligonucleotides FISH-probe, Alphaproteobacteria, targeted with ALF968 oligonucleotides FISH-probe, Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Archaea, targed with ARCH915 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacterioplankton, Balneatrix, targeted with Bal731 oligonucleotides FISH-probe, Betaproteobacteria, targeted with BET42a oligonucleotides FISH-probe, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, Cytophaga-Flavobacterium cluster, targeted with CF319a oligonucleotide FISH-probe, DATE/TIME, DEPTH, water, Epifluorescence microscopy after DAPI staining, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Formosa, targeted with FORM181A oligonucleotides FISH-probe, targeted with FORM181B oligonucleotides FISH-probe, Gammaproteobacteria

Subject Geographic: LATITUDE: 54.188330 * LONGITUDE: 7.900000 * DATE/TIME START: 2009-01-05T00:00:00 * DATE/TIME END: 2012-06-20T00:00:00 * MINIMUM DEPTH, water: 0.5 m * MAXIMUM DEPTH, water: 0.5 m

File Description: text/tab-separated-values, 5239 data points

Relation: Krüger, Karen; Francis, T Ben; Chafee, Meghan; Amann, Rudolf I; Glavina del Rio, Tijana; Teeling, Hanno (2019): North Sea spring phytoplankton bloom metagenome assemblies and metagenome assembled genomes (MAGs). European Nucleotide Archive (ENA), insdc:PRJEB28156; Teeling, Hanno; Fuchs, Bernhard M; Becher, Dieter; Klockow, C; Gardebrecht, A; Bennke, Christin M; Kassabgy, Mariette; Huang, S; Waldmann, Jost; Weber, M; Klindworth, A; Otto, Andreas; Lange, J; Bernhardt, J; Reinsch, C; Hecker, M; Peplies, J; Bockelmann, Frank Detlef; Callies, U; Gerdts, Gunnar; Wichels, Antje; Wiltshire, Karen Helen; Glöckner, Frank Oliver; Schweder, Thomas (2012): Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom. Science, 336(6081), 608-611, https://doi.org/10.1126/science.1218344; Teeling, Hanno; Fuchs, Bernhard M; Bennke, Christin M; Krüger, Karen; Chafee, Meghan; Kappelmann, Lennart; Reintjes, Greta; Waldmann, Jost; Quast, Christian; Glöckner, Frank Oliver; Lucas, Judith; Wichels, Antje; Gerdts, Gunnar; Wiltshire, Karen Helen; Amann, Rudolf I (2016): Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms. eLife Sciences Publications Ltd., 1-29, https://doi.org/10.7554/eLife.11888; Wiltshire, Karen Helen (2010): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2009. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.737388; Wiltshire, Karen Helen (2010): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2009. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.736644; Wiltshire, Karen Helen (2011): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2010. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.756613; Wiltshire, Karen Helen (2012): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2010. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.783570; Wiltshire, Karen Helen (2012): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2011. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.783571; Wiltshire, Karen Helen (2013): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2011. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.820157; Wiltshire, Karen Helen (2013): Hydrochemistry at time series station Helgoland Roads, North Sea, in 2012. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.810745; Wiltshire, Karen Helen (2013): Phytoplankton abundance at time series station Helgoland Roads, North Sea, in 2012. Alfred Wegener Institute - Biological Institute Helgoland, PANGAEA, https://doi.org/10.1594/PANGAEA.820206; Oligonucleotide probes and formamide concentration used in Teeling et al., 2012 (URI: https://store.pangaea.de/Publications/Teeling-etal_2012/Oligonucleotide-probes_Teeling-etal_2012.pdf); Oligonucleotide probes and formamide concentration used in Teeling et al., 2016 (URI: https://store.pangaea.de/Publications/Teeling-etal_2016/Oligonucleotide-probes_Teeling-etal_2016.pdf); https://doi.pangaea.de/10.1594/PANGAEA.860256; https://doi.org/10.1594/PANGAEA.860256

Availability: https://doi.org/10.1594/PANGAEA.860256
https://doi.org/10.1126/science.1218344
https://doi.org/10.7554/eLife.11888
https://doi.org/10.1594/PANGAEA.737388
https://doi.org/10.1594/PANGAEA.736644
https://doi.org/10.1594/PANGAEA.756613
https://doi.org/10.1594/PANGAEA.783570
https://doi.org/10.1594/PANGAEA.783571
https://doi.org/10.1594/PANGAEA.820157
https://doi.org/10.1594/PANGAEA.810745

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