Authors: McNichol, Jesse C., Dyksma, Stefan, Mussmann, Marc, Seewald, Jeffrey S., Sylva, Sean P., Sievert, Stefan M.
Superior Title: McNichol, J., Dyksma, S., Mussmann, M., Seewald, J. S., Sylva, S. P., & Sievert, S. M. (2022). Genus-specific carbon fixation activity measurements reveal distinct responses to oxygen among hydrothermal vent campylobacteria. Applied and Environmental Microbiology, 88(2), e02083-21. ; doi:10.1128/AEM.02083-21
Subject Terms: Arcobacter, CARD-FISH, Campylobacteria, Chemoautotrophy, Deep-sea hydrothermal vents, FACS, Niche differentiation, Sulfur oxidation, Sulfurimonas, Sulfurovum, geo, envir
Relation: https://hdl.handle.net/1912/29318
Contributors: Fundación General CSIC, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España)
Subject Terms: Plastic leaching, Microplastics, Microbial community, BONCAT, CARD-FISH, DOM, envir, geo
Relation: http://hdl.handle.net/10261/278898
Availability: http://hdl.handle.net/10261/278898
Authors: Zhang, Yingxin, Song, Shuqun, Chen, Tiantian, Sun, Xiaoxia, Li, Caiwen
Subject Terms: Noctiluca scintillans, Dinoflagellate, Population dynamics, Reproduction, Environmental factors, Environmental Sciences & Ecology, Marine & Freshwater Biology, Oceanography, Ecology, RED-TIDE DINOFLAGELLATE, REAL-TIME PCR, COASTAL WATERS, RAPID DETECTION, CARD-FISH, MACARTNEY, BLOOM, QUANTIFICATION, DINOPHYCEAE, GROWTH, envir, socio
Availability: http://ir.qdio.ac.cn/handle/337002/180093
Authors: Brunet, Maéva, Le Duff, Nolwen, Fuchs, Bernhard, Amann, Rudolf, Barbeyron, Tristan, Thomas, François
Contributors: Laboratoire de Biologie Intégrative des Modèles Marins (LBI2M), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Max Planck Institute for Marine Microbiology, Max-Planck-Gesellschaft, ANR-18-CE02-0001,ALGAVOR,Stratégies écologiques et métaboliques de bactéries spécialistes de la dégradation des macroalgues(2018)
Superior Title: ISSN: 0723-2020 ; Systematic and Applied Microbiology ; https://hal.sorbonne-universite.fr/hal-03417302 ; Systematic and Applied Microbiology, 2021, 44 (6), pp.126269. ⟨10.1016/j.syapm.2021.126269⟩.
Subject Terms: Zobellia, qPCR, CARD-FISH, macroalgae, marine flavobacteria, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, envir, geo
Relation: https://hal.sorbonne-universite.fr/hal-03417302/file/qPCR-FISH_SAM_revised.pdf; https://hal.sorbonne-universite.fr/hal-03417302
Availability:
https://doi.org/10.1016/j.syapm.2021.126269
https://hal.sorbonne-universite.fr/hal-03417302/file/qPCR-FISH_SAM_revised.pdf
https://hal.sorbonne-universite.fr/hal-03417302
Authors: Kasia Piwosz, Tanja Shabarova, Jakob Pernthaler, Thomas Posch, Karel Šimek, Petr Porcal, Michaela M. Salcher
Superior Title: mSphere, Vol 5, Iss 2 (2020)
Subject Terms: CARD-FISH, amplicon sequencing, bacterial communities, bacterial community structure, bacterial dynamics, eukaryotic communities, Microbiology, QR1-502, envir, geo
Relation: https://doi.org/10.1128/mSphere.00052-20
Availability: https://doi.org/10.1128/mSphere.00052-20
Authors: Juyal, Archana, Eickhorst, Thilo, Falconer, Ruth, Baveye, Philippe, Spiers, Andrew, Otten, Wilfred
Superior Title: Frontiers in Environmental Science 73 (6), 12 p. (2018)
Subject Terms: X-ray CT scanning, Bacterial growth, Bacterial spread, CARD-FISH, Microcosm Experiment, Pseudomonas, Bacillus subtilis, envir, geo
Authors: Juyal, Archana, Eickhorst, Thilo, Falconer, Ruth, Baveye, Philippe C., Spiers, Andrew, Otten, Wilfred
Superior Title: Juyal , A , Eickhorst , T , Falconer , R , Baveye , P C , Spiers , A & Otten , W 2018 , ' Control of pore geometry in soil microcosms and its effect on the growth and spread of Pseudomonas and Bacillus sp. ' , Frontiers in Environmental Science , vol. 6 , 73 . https://doi.org/10.3389/fenvs.2018.00073
Subject Terms: X-ray CT scanning, Bacterial growth, Bacterial spread, CARD-FISH, Microcosm Experiment, Pseudomonas, Bacillus subtilis, envir, geo
Relation: https://rke.abertay.ac.uk/ws/files/15047696/Falconer_ControlOfPoreGeometryInSoilMicrocosms_Published_2018.pdf; https://rke.abertay.ac.uk/en/publications/e5913689-0ba7-45b5-82d9-64441b55cab9
Availability:
https://doi.org/10.3389/fenvs.2018.00073
https://rke.abertay.ac.uk/ws/files/15047696/Falconer_ControlOfPoreGeometryInSoilMicrocosms_Published_2018.pdf
https://rke.abertay.ac.uk/en/publications/e5913689-0ba7-45b5-82d9-64441b55cab9
Authors: Juyal, Archana, Eickhorst, Thilo, Falconer, Ruth, Baveye, Philippe, Spiers, Andrew, Otten, Wilfred
Superior Title: Frontiers in Environmental Science 73 (6), 12 p. (2018)
Subject Terms: X-ray CT scanning, Bacterial growth, Bacterial spread, CARD-FISH, Microcosm Experiment, Pseudomonas, Bacillus subtilis, envir, geo
Authors: Juyal, Archana, Eickhorst, Thilo, Falconer, Ruth, Baveye, Philippe, Spiers, Andrew, Otten, Wilfred
Contributors: Abertay University (Abertay University), University of Bremen, Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Université Paris-Saclay, Cranfield University
Superior Title: ISSN: 2296-665X ; Frontiers in Environmental Science ; https://hal.archives-ouvertes.fr/hal-01824177 ; Frontiers in Environmental Science, Frontiers, 2018, 6 (73), 12 p. ⟨10.3389/fenvs.2018.00073⟩ ; https://www.frontiersin.org/articles/10.3389/fenvs.2018.00073/abstract.
Subject Terms: Pseudomonas, Bacillus subtilis, X-ray CT scanning, Bacterial growth, Bacterial spread, CARD-FISH, Microcosm Experiment, [SDV]Life Sciences [q-bio], envir, geo
Relation: https://hal.archives-ouvertes.fr/hal-01824177/file/fenvs-06-00073_1.pdf; https://hal.archives-ouvertes.fr/hal-01824177
Authors: Maliheh Mehrshad, Michaela M Salcher, Yusuke Okazaki, Shin-ichi Nakano, Karel Šimek, Adrian-Stefan Andrei, Rohit Ghai
Superior Title: Microbiome, Vol 6, Iss 1, Pp 1-13 (2018)
Subject Terms: Chloroflexi, Freshwater ecology, Metagenomics, CARD-FISH, Microbial ecology, QR100-130, envir, geo
Availability: https://doi.org/10.1186/s40168-018-0563-8
Authors: Farnelid, H, Turk-Kubo, K, Muñoz-Marín, MC, Zehr, JP
Superior Title: Aquatic Microbial Ecology, vol 77, iss 3
Subject Terms: UCYN-A, Symbiosis, nifH, qPCR, Next generation amplicon sequencing, CARD-FISH, Braarudosphaera bigelowii, Ecology, Microbiology, Marine Biology & Hydrobiology, envir, geo
Subject Geographic: 125 - 138
Availability: https://escholarship.org/uc/item/5487n4j2
Authors: LA RIVIERE, Marie, GAREL, Marc, BALLY, Marc
Contributors: Institut méditerranéen d'océanologie (MIO), Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Toulon (UTLN), Service du Patrimoine Naturel (SPN), Muséum national d'Histoire naturelle (MNHN)-Ministère de l'Environnement et du Cadre de vie
Superior Title: Hyper Article en Ligne - Sciences de l'Homme et de la Société ; ISSN: 0025-3162 ; EISSN: 1432-1793 ; Marine Biology ; Marine Biology, Springer Verlag, 2016, 163, ⟨10.1007/s00227-016-2975-y⟩
Relation: hal-01365605; 10670/1.bafq0q; https://hal.archives-ouvertes.fr/hal-01365605
Authors: Ubaldi, C.
Contributors: Ubaldi, C.
Subject Terms: Bioremediation, CARD-FISH, Dehalococcoides mccartyi, Marine sediment, Polychlorinated biphenyl, Reductive dehalogenase gene, qPCR, envir, socio
Relation: https://hdl.handle.net/20.500.12079/1310
Authors: Díez-Vives, Cristina, Gasol, Josep M., Acinas, Silvia G.
Superior Title: Systematic and Applied Microbiology epub (2013)
Subject Terms: Bacteroidetes populations, Structure, Diversity, DGGE, CARD-FISH, Spatial and temporal variability, envir, geo
Relation: https://zenodo.org/record/8297
Availability: https://zenodo.org/record/8297
Contributors: Evolution des Protistes et Ecosystèmes Pélagiques (EPEP), Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Max Planck Institute for Marine Microbiology, Max-Planck-Gesellschaft, Marie Curie Early Stage Training Site in Marine Microbiology (MarMic EST) MEST-CT-2004-007776, International Max Planck Research School of Marine Microbiology (MarMic)
Superior Title: ISSN: 0948-3055 ; Aquatic Microbial Ecology ; https://hal.science/hal-01258247 ; Aquatic Microbial Ecology, 2011, 65 (2), pp.129-U139. ⟨10.3354/ame01535⟩.
Subject Terms: Coastal lake ecology, Planctomycetes, Bacterial diversity, FISH, CARD-FISH, 16S rRNA gene sequencing, [SDV]Life Sciences [q-bio], [SDE]Environmental Sciences, geo, envir
Relation: https://hal.science/hal-01258247
Contributors: Evolution des Protistes et Ecosystèmes Pélagiques (EPEP), Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Max Planck Institute for Marine Microbiology, Max-Planck-Gesellschaft, Marie Curie Early Stage Training Site in Marine Microbiology (MarMic EST) MEST-CT-2004-007776, International Max Planck Research School of Marine Microbiology (MarMic)
Superior Title: ISSN: 0948-3055 ; Aquatic Microbial Ecology ; https://hal.science/hal-01258247 ; Aquatic Microbial Ecology, 2011, 65 (2), pp.129-U139. ⟨10.3354/ame01535⟩.
Subject Terms: Coastal lake ecology, Planctomycetes, Bacterial diversity, FISH, CARD-FISH, 16S rRNA gene sequencing, [SDV]Life Sciences [q-bio], [SDE]Environmental Sciences, geo, envir
Relation: https://hal.science/hal-01258247
Contributors: Evolution des Protistes et Ecosystèmes Pélagiques (EPEP), Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff Roscoff (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Max Planck Institute for Marine Microbiology, Max-Planck-Gesellschaft, Marie Curie Early Stage Training Site in Marine Microbiology (MarMic EST) MEST-CT-2004-007776, International Max Planck Research School of Marine Microbiology (MarMic)
Superior Title: Hyper Article en Ligne - Sciences de l'Homme et de la Société ; ISSN: 0948-3055 ; Aquatic Microbial Ecology ; Aquatic Microbial Ecology, Inter Research, 2011, 65 (2), pp.129-U139. ⟨10.3354/ame01535⟩
Subject Terms: Coastal lake ecology, Planctomycetes, Bacterial diversity, FISH, CARD-FISH, 16S rRNA gene sequencing, geo, envir
Relation: hal-01258247; 10670/1.bbyjps; https://hal.archives-ouvertes.fr/hal-01258247
Authors: Wietz, Matthias, Gram, Lone, Jørgensen, Bo, Schramm, Andreas
Superior Title: Wietz , M , Gram , L , Jørgensen , B & Schramm , A 2010 , ' Latitudinal patterns in the abundance of major marine bacterioplankton groups ' , Aquatic Microbial Ecology , vol. 61 , pp. 179-189 . https://doi.org/10.3354/ame01443
Subject Terms: Marine bacterioplankton · Global quantification · Latitudinal pattern · Biogeography · CARD-FISH · PCA, envir, geo
Relation: https://pure.au.dk/portal/da/publications/latitudinal-patterns-in-the-abundance-of-major-marine-bacterioplankton-groups(6c69781a-30d2-4a08-a9b3-01cdb553829d).html
Availability:
https://doi.org/10.3354/ame01443
https://pure.au.dk/portal/da/publications/latitudinal-patterns-in-the-abundance-of-major-marine-bacterioplankton-groups(6c69781a-30d2-4a08-a9b3-01cdb553829d).html
Authors: Brissac, Terry, Gros, Olivier, Merçot, Hervé
Contributors: Systématique, adaptation, évolution (SAE), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)
Superior Title: ISSN: 0168-6496.
Subject Terms: Bivalvia, CARD-FISH, sulfur-oxidizing gill endosymbiont, transmission mode, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, envir
Availability:
https://doi.org/10.1111/j.1574-6941.2008.00626.x
https://hal.univ-antilles.fr/hal-00751560
Authors: Brissac, Terry, Gros, Olivier, Merçot, Hervé
Contributors: Systématique, adaptation, évolution (SAE), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)
Superior Title: Hyper Article en Ligne - Sciences de l'Homme et de la Société ; ISSN: 0168-6496 ; EISSN: 1574-6941 ; FEMS Microbiology Ecology ; FEMS Microbiology Ecology, Wiley-Blackwell, 2009, 67 (2), pp.261-267. ⟨10.1111/j.1574-6941.2008.00626.x⟩
Subject Terms: Bivalvia, CARD-FISH, sulfur-oxidizing gill endosymbiont, transmission mode, envir, geo
Relation: hal-00751560; 10670/1.0n24r1; https://hal.univ-antilles.fr/hal-00751560