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1
CARD-FISH cell counts of taxonomic bacterial groups from different microbiomes in Fram Strait used to evalute primer sets

Authors: Fadeev, Eduard, Cardozo-Mino, Magda Guadalupe, Rapp, Josephine Z, Bienhold, Christina, Salter, Ian, Salman-Carvalho, Verena, Molari, Massimiliano, Tegetmeyer, Halina E, Buttigieg, Pier Luigi, Boetius, Antje

Subject Terms: 2-(4-Amidinophenyl)-1H-indole-6-carboxamidine, Alteromonas, cells, ARK-XXX/1.2, Bacteroidetes, CARD-FISH, cell counts, CTD/Rosette with Underwater Vision Profiler, CTD-RO_UVP, DEPTH, ice/snow, water, EG_I, EG_IV, Event label, Fram Strait, Gammaproteobacteria, Giant box corer, GKG, ICE, Ice station, North Greenland Sea, Polaribacter, Polarstern, PS99/043-3, PS99/048-15, PS99/051-2, PS99/053-8, PS99.2, SAR11 clade

Subject Geographic: MEDIAN LATITUDE: 79.100290 * MEDIAN LONGITUDE: -0.049040 * SOUTH-BOUND LATITUDE: 78.615500 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 79.972830 * EAST-BOUND LONGITUDE: 5.029830 * DATE/TIME START: 2016-06-27T16:16:00 * DATE/TIME END: 2016-07-04T04:48:00 * MINIMUM ELEVATION: -2609.9 m * MAXIMUM ELEVATION: -1009.7 m

File Description: text/tab-separated-values, 48 data points

Relation: Fadeev, Eduard; Cardozo-Mino, Magda Guadalupe; Rapp, Josephine Z; Bienhold, Christina; Salter, Ian; Salman-Carvalho, Verena; Molari, Massimiliano; Tegetmeyer, Halina E; Buttigieg, Pier Luigi; Boetius, Antje (2021): Comparison of Two 16S rRNA Primers (V3–V4 and V4–V5) for Studies of Arctic Microbial Communities. Frontiers in Microbiology, 12, https://doi.org/10.3389/fmicb.2021.637526; https://doi.pangaea.de/10.1594/PANGAEA.928720; https://doi.org/10.1594/PANGAEA.928720

Availability: https://doi.org/10.1594/PANGAEA.928720
https://doi.org/10.3389/fmicb.2021.637526

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2
Cell concentrations of five bacterial key groups in ice, water, and sediment of the Fram Strait and the central Arctic Ocean

Authors: Fadeev, Eduard, Cardozo-Mino, Magda Guadalupe, Salman-Carvalho, Verena, Boetius, Antje

Subject Terms: Arctic Ocean, ARK-XXX/1.2, ARK-XXX/3, Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, CTD/Rosette, CTD/Rosette with Underwater Vision Profiler, CTD-RO, CTD-RO_UVP, Date/Time of event, DEPTH, sediment/rock, water, EG_I, EG_IV, Elevation of event, Event label, Fluorescence determination of DAPI stain, Fram Strait, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, HG_IV, Latitude of event, Longitude of event, Method/Device of event, Microbial abundance, cells

Subject Geographic: MEDIAN LATITUDE: 81.482573 * MEDIAN LONGITUDE: 17.953381 * SOUTH-BOUND LATITUDE: 78.816170 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 86.826170 * EAST-BOUND LONGITUDE: 61.836500 * DATE/TIME START: 2016-06-27T02:36:00 * DATE/TIME END: 2016-09-27T00:10:00 * MINIMUM ELEVATION: -2613.5 m * MAXIMUM ELEVATION: -769.8 m

File Description: text/tab-separated-values, 56 data points

Relation: Oligonucleotide probes and formamide concentration of the water column and sediment samples from the Fram Strait and the central Arctic Ocean (URI: https://store.pangaea.de/Publications/Fadeev-etal_2019/Oligonucleotide-probes_Fadeev-etal_2019.pdf); https://doi.pangaea.de/10.1594/PANGAEA.906097

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