Authors: Katsaounis, Dimitrios^{Aff1, IDs11538024012860_cor1}, Harbour, Nicholas, Williams, Thomas, Chaplain, Mark AJ, Sfakianakis, Nikolaos

Superior Title: Bulletin of Mathematical Biology: A journal devoted to research at the interface of the life and mathematical sciences. 86(6)

Authors: Szymańska, Zuzanna, Lachowicz, Mirosław, Sfakianakis, Nikolaos, Chaplain, Mark A. J.

Contributors: University of St Andrews. Applied Mathematics

Subject Terms: Cancer invasion, Phenotypic switching, Epithelial-mesenchymal transition, Invasive foci, Multifocal cancer, RC0254 Neoplasms. Tumors. Oncology (including Cancer), T-DAS, SDG 3 - Good Health and Well-being, MCC, RC0254

File Description: application/pdf

Relation: Journal of Computational and Applied Mathematics; Szymańska , Z , Lachowicz , M , Sfakianakis , N & Chaplain , M A J 2024 , ' Mathematical modelling of cancer invasion : phenotypic transitioning provides insight into multifocal foci formation ' , Journal of Computational and Applied Mathematics , vol. 75 , 102175 . https://doi.org/10.1016/j.jocs.2023.102175; PURE: 295709542; PURE UUID: b79daf14-a65d-4580-a7f1-dabb0355458e; BibCode: 2023arXiv230514388S; ORCID: /0000-0001-5727-2160/work/147966924; ORCID: /0000-0002-2675-6338/work/147967399; Scopus: 85178324897; http://hdl.handle.net/10023/28796; https://doi.org/10.1016/j.jocs.2023.102175; https://arxiv.org/abs/2305.14388; http://adsabs.harvard.edu/abs/2023arXiv230514388S

Availability: https://doi.org/10.1016/j.jocs.2023.102175
http://hdl.handle.net/10023/28796
https://arxiv.org/abs/2305.14388
http://adsabs.harvard.edu/abs/2023arXiv230514388S

Authors: Katsaounis, Dimitrios, Chaplain, Mark Andrew Joseph, Sfakianakis, Nikolaos

Contributors: EPSRC, University of St Andrews. School of Mathematics and Statistics, University of St Andrews. Applied Mathematics

Subject Terms: Cancer invasion, Multiscale modelling, Hybrid continuum-discrete, Coupled partial and stochastic partial differential equations, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), T-NDAS, SDG 3 - Good Health and Well-being, MCP, QA, QH301, RC0254

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Relation: Journal of Mathematical Biology; Katsaounis , D , Chaplain , M A J & Sfakianakis , N 2023 , ' Stochastic differential equation modelling of cancer cell migration and tissue invasion ' , Journal of Mathematical Biology , vol. 87 , 8 . https://doi.org/10.1007/s00285-023-01934-4; PURE: 286024315; PURE UUID: f4b46fca-7812-49fd-a182-66f682189b20; Scopus: 85162010961; ORCID: /0000-0001-5727-2160/work/137914897; ORCID: /0000-0002-2675-6338/work/137915595; ORCID: /0009-0002-7918-9805/work/137915716; http://hdl.handle.net/10023/27856; https://doi.org/10.1007/s00285-023-01934-4; EP/S030875/1

Availability: https://doi.org/10.1007/s00285-023-01934-4
http://hdl.handle.net/10023/27856

Authors: Xiao, Yunchen, Thomas, Len, Chaplain, Mark Andrew Joseph

Contributors: University of St Andrews. Applied Mathematics, University of St Andrews. School of Mathematics and Statistics, University of St Andrews. Statistics, University of St Andrews. Centre for Research into Ecological & Environmental Modelling

Subject Terms: Tumour cells, Cancer invasion, Metastasis, Approximate Bayesian computation, Bhattacharyya distance, Gradient matching, Generalized additive models, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), DAS, SDG 3 - Good Health and Well-being, QA, QH301, RC0254

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Relation: Royal Society Open Science; Xiao , Y , Thomas , L & Chaplain , M A J 2021 , ' Calibrating models of cancer invasion : parameter estimation using approximate Bayesian computation and gradient matching ' , Royal Society Open Science , vol. 8 , no. 6 , 202237 . https://doi.org/10.1098/rsos.202237; PURE: 274559124; PURE UUID: ad6cee3e-4e6a-478b-a77b-591e2208b806; ORCID: /0000-0002-7436-067X/work/96489382; ORCID: /0000-0001-5727-2160/work/96489554; WOS: 000663721400001; Scopus: 85111127910; http://hdl.handle.net/10023/23483; https://doi.org/10.1098/rsos.202237

Availability: https://doi.org/10.1098/rsos.202237
http://hdl.handle.net/10023/23483

Authors: Franssen, Linnea C., Sfakianakis, Nikolaos, Chaplain, Mark Andrew Joseph

Superior Title: Franssen , L C , Sfakianakis , N & Chaplain , M A J 2021 , ' A novel 3D atomistic-continuum cancer invasion model : in silico simulations of an in vitro organotypic invasion assay ' , Journal of Theoretical Biology , vol. 522 , 110677 . https://doi.org/10.1016/j.jtbi.2021.110677

Subject Terms: Cancer invasion, Organotypic assay, Atomistic-continuum model

File Description: application/pdf

Availability: https://doi.org/10.1016/j.jtbi.2021.110677
https://risweb.st-andrews.ac.uk/portal/en/researchoutput/a-novel-3d-atomisticcontinuum-cancer-invasion-model(d0d6a4a6-429c-490a-9e3c-9067d6164132).html
https://research-repository.st-andrews.ac.uk/bitstream/10023/25111/1/elsarticle_template_compressed.pdf

Authors: Trucu, Dumitru^Aff21, Domschke, Pia^Aff22, Gerisch, Alf^Aff22, Chaplain, Mark A. J.^Aff23

Contributors: Morel, Jean-Michel, Editor-in-chief^Aff1, Brion, Michel, Series editor^Aff2, Teissier, Bernard, Editor-in-chief^Aff3, De Lellis, Camillo, Series editor^Aff4, Di Bernardo, Mario, Series editor^Aff5, Figalli, Alessio, Series editor^Aff6, Khoshnevisan, Davar, Series editor^Aff7, Kontoyiannis, Ioannis, Series editor^Aff8, Lugosi, Gábor, Series editor^Aff9, Podolskij, Mark, Series editor^Aff10, Serfaty, Sylvia, Series editor^Aff11, Wienhard, Anna, Series editor^Aff12, Ciarletta, Pasquale^Aff13, Hillen, Thomas^Aff14, Othmer, Hans^Aff15, Preziosi, Luigi^{Aff16, Aff18}, Trucu, Dumitru^Aff17, Chaplain, Mark, editor^Aff19, Pugliese, Andrea, editor^Aff20

Superior Title: Mathematical Models and Methods for Living Systems : Levico Terme, Italy 2014. 2167:275-321

Authors: Sfakianakis, Nikolaos, Madzvamuse, Anotida, Chaplain, Mark Andrew Joseph

Superior Title: Sfakianakis , N , Madzvamuse , A & Chaplain , M A J 2020 , ' A hybrid multiscale model for cancer invasion of the extracellular matrix ' , Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal , vol. 18 , no. 2 , pp. 824–850 . https://doi.org/10.1137/18M1189026

Subject Terms: Cancer invasion, Multiscale modelling, Hybrid continuum-discrete, Coupled partial and stochastic partial differential equations

File Description: application/pdf

Availability: https://doi.org/10.1137/18M1189026
https://risweb.st-andrews.ac.uk/portal/en/researchoutput/a-hybrid-multiscale-model-for-cancer-invasion-of-the-extracellular-matrix(835e0e06-5b9e-445d-8ade-37870a4076cb).html
https://research-repository.st-andrews.ac.uk/bitstream/10023/19387/1/sfakianakis_etal_siammms2020.pdf

Authors: Hodgkinson, Arran^Aff1, Chaplain, Mark A. J.^Aff2, Domschke, Pia^Aff3, Trucu, Dumitru^Aff4

Superior Title: Bulletin of Mathematical Biology: A Journal Devoted to Research at the Junction of Computational, Theoretical and Experimental BiologyOfficial Journal of The Society for Mathematical Biology. 80(4):701-737

Authors: Trucu, Dumitru^Aff3, Chaplain, Mark A. J.^Aff3

Contributors: Delitala, Marcello, editor^Aff1, Ajmone Marsan, Giulia, editor^Aff2

Superior Title: Managing Complexity, Reducing Perplexity : Modeling Biological Systems. 67:45-53

Authors: Domschke, Pia, Trucu, Dumitru, Gerisch, Alf, Chaplain, Mark A. J.

Superior Title: Journal of Mathematical Biology. :1-45

Authors: Peng, Lu, Trucu, Dumitru, Lin, Ping, Thompson, Alastair, Chaplain, Mark A. J.

Superior Title: Bulletin of Mathematical Biology: A Journal Devoted to Research at the Junction of Computational, Theoretical and Experimental BiologyOfficial Journal of The Society for Mathematical Biology. March 2017 79(3):389-429

Authors: Franssen, Linnea C., Sfakianakis, Nikolaos, Chaplain, Mark Andrew Joseph

Contributors: University of St Andrews. Applied Mathematics, University of St Andrews. School of Mathematics and Statistics

Subject Terms: Cancer invasion, Organotypic assay, Atomistic-continuum model, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), DAS, SDG 3 - Good Health and Well-being, QA, QH301, RC0254

File Description: application/pdf

Relation: Journal of Theoretical Biology; Franssen , L C , Sfakianakis , N & Chaplain , M A J 2021 , ' A novel 3D atomistic-continuum cancer invasion model : in silico simulations of an in vitro organotypic invasion assay ' , Journal of Theoretical Biology , vol. 522 , 110677 . https://doi.org/10.1016/j.jtbi.2021.110677; PURE: 273263579; PURE UUID: d0d6a4a6-429c-490a-9e3c-9067d6164132; PubMed: 33781776; ORCID: /0000-0001-5727-2160/work/91685807; ORCID: /0000-0002-2675-6338/work/91685899; Scopus: 85104335410; WOS: 000652405200001; http://hdl.handle.net/10023/25111; https://doi.org/10.1016/j.jtbi.2021.110677

Availability: https://doi.org/10.1016/j.jtbi.2021.110677
http://hdl.handle.net/10023/25111

Authors: Xiao, Yunchen, Thomas, Len, Chaplain, Mark

Subject Terms: approximate Bayesian computation (ABC), tumour cell, Generalized Additive Model, cancer invasion

Relation: https://zenodo.org/communities/dryad; https://zenodo.org/record/4341899; https://doi.org/10.5061/dryad.mkkwh70z2; oai:zenodo.org:4341899

Availability: https://doi.org/10.5061/dryad.mkkwh70z2
https://zenodo.org/record/4341899

Authors: Andasari, Vivi, Gerisch, Alf, Lolas, Georgios, South, Andrew P., Chaplain, Mark A. J.

Superior Title: Journal of Mathematical Biology. July 2011 63(1):141-171

Authors: Xiao, Yunchen, Thomas, Len, Chaplain, Mark

Subject Terms: FOS Mathematics, approximate Bayesian computation ABC, tumour cell, Generalized Additive Model, cancer invasion

Availability: https://doi.org/10.5061/dryad.mkkwh70z2

Authors: Hodgkinson, Arran, Chaplain, Mark Andrew Joseph, Domschke, Pia, Trucu, Dumitru

Contributors: University of St Andrews. Applied Mathematics

Subject Terms: Cancer invasion, Structured cell population dynamics, Computational modelling, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), NDAS, SDG 3 - Good Health and Well-being, QA, QH301, RC0254

File Description: application/pdf

Relation: Bulletin of Mathematical Biology; Hodgkinson , A , Chaplain , M A J , Domschke , P & Trucu , D 2018 , ' Computational approaches and analysis for a spatio-structural-temporal invasive carcinoma model ' , Bulletin of Mathematical Biology , vol. 80 , no. 4 , pp. 701-737 . https://doi.org/10.1007/s11538-018-0396-4; PURE: 252047094; PURE UUID: 48269cba-73ff-4b4c-aa49-64ea839d6560; Scopus: 85044341233; ORCID: /0000-0001-5727-2160/work/55378859; WOS: 000428067300001; http://hdl.handle.net/10023/17200; https://doi.org/10.1007/s11538-018-0396-4

Availability: https://doi.org/10.1007/s11538-018-0396-4
http://hdl.handle.net/10023/17200

Authors: Szymańska, Zuzanna, Lachowicz, Mirosław, Sfakianakis, Nikolaos, Chaplain, Mark A.J.

Superior Title: Journal of Computational Science; Jan2024, Vol. 75, pN.PAG-N.PAG, 1p

Subject Terms: BREAST, EPITHELIAL-mesenchymal transition, METASTASIS, MATHEMATICAL models, PHENOTYPES, PHENOTYPIC plasticity

Authors: Domschke, Pia, Trucu, Dumitru, Gerisch, Alf, Chaplain, Mark Andrew Joseph

Contributors: University of St Andrews. Applied Mathematics

Subject Terms: Structured population modelling, Spatio-temporal model, Cell-surface receptors, Cancer invasion, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), NDAS, BDC, SDG 3 - Good Health and Well-being, QA, QH301, RC0254

File Description: application/pdf

Relation: Journal of Mathematical Biology; Domschke , P , Trucu , D , Gerisch , A & Chaplain , M A J 2017 , ' Structured models of cell migration incorporating molecular binding processes ' , Journal of Mathematical Biology , vol. 75 , no. 6-7 , pp. 1517-1561 . https://doi.org/10.1007/s00285-017-1120-y; PURE: 249576825; PURE UUID: 3cc2713e-481f-4174-982e-93747c899f46; Scopus: 84995539364; ORCID: /0000-0001-5727-2160/work/55378939; WOS: 000413032600007; http://hdl.handle.net/10023/13127; https://doi.org/10.1007/s00285-017-1120-y

Availability: https://doi.org/10.1007/s00285-017-1120-y
http://hdl.handle.net/10023/13127

Authors: Peng, Lu, Trucu, Dumitru, Lin, Ping, Thompson, Alastair, Chaplain, Mark A. J.

Contributors: University of St Andrews. Applied Mathematics

Subject Terms: Cancer invasion, Multiscale modelling, uPA system, QA Mathematics, QH301 Biology, RC0254 Neoplasms. Tumors. Oncology (including Cancer), NDAS, SDG 3 - Good Health and Well-being, QA, QH301, RC0254

File Description: application/pdf

Relation: Bulletin of Mathematical Biology; Peng , L , Trucu , D , Lin , P , Thompson , A & Chaplain , M A J 2017 , ' A multiscale mathematical model of tumour invasive growth ' , Bulletin of Mathematical Biology , vol. 79 , no. 3 , pp. 389-429 . https://doi.org/10.1007/s11538-016-0237-2; PURE: 248040855; PURE UUID: d35a600a-aec8-4a47-8346-6529d6a88053; Scopus: 85013101806; ORCID: /0000-0001-5727-2160/work/55379064; WOS: 000395156200001; http://hdl.handle.net/10023/12739; https://doi.org/10.1007/s11538-016-0237-2

Availability: https://doi.org/10.1007/s11538-016-0237-2
http://hdl.handle.net/10023/12739

Authors: Deakin, Niall E., Chaplain, Mark A. J.

Superior Title: Deakin , N E & Chaplain , M A J 2013 , ' Mathematical modeling of cancer invasion: The role of membrane-bound matrix metalloproteinases ' , Frontiers in Oncology , vol. 3 . https://doi.org/10.3389/fonc.2013.00070

Subject Terms: Cancer invasion, Metalloproteinases, Membrane-bound MMPs, Mathematical model, Extracellular matrix

Availability: https://doi.org/10.3389/fonc.2013.00070
https://risweb.st-andrews.ac.uk/portal/en/researchoutput/mathematical-modeling-of-cancer-invasion(85436ce9-12f0-4138-8034-d7a36fd629d4).html
http://www.scopus.com/inward/record.url?eid=2-s2.0-84890653380&partnerID=40&md5=650ab7c4700e5f2f0707c6f520224539