Authors: Fadeev, Eduard, Cardozo-Mino, Magda Guadalupe, Rapp, Josephine Z, Bienhold, Christina, Salter, Ian, Salman-Carvalho, Verena, Molari, Massimiliano, Tegetmeyer, Halina E, Buttigieg, Pier Luigi, Boetius, Antje
Subject Terms: 2-(4-Amidinophenyl)-1H-indole-6-carboxamidine, Alteromonas, cells, ARK-XXX/1.2, Bacteroidetes, CARD-FISH, cell counts, CTD/Rosette with Underwater Vision Profiler, CTD-RO_UVP, DEPTH, ice/snow, water, EG_I, EG_IV, Event label, Fram Strait, Gammaproteobacteria, Giant box corer, GKG, ICE, Ice station, North Greenland Sea, Polaribacter, Polarstern, PS99/043-3, PS99/048-15, PS99/051-2, PS99/053-8, PS99.2, SAR11 clade
File Description: text/tab-separated-values, 48 data points
Relation: Fadeev, Eduard; Cardozo-Mino, Magda Guadalupe; Rapp, Josephine Z; Bienhold, Christina; Salter, Ian; Salman-Carvalho, Verena; Molari, Massimiliano; Tegetmeyer, Halina E; Buttigieg, Pier Luigi; Boetius, Antje (2021): Comparison of Two 16S rRNA Primers (V3–V4 and V4–V5) for Studies of Arctic Microbial Communities. Frontiers in Microbiology, 12, https://doi.org/10.3389/fmicb.2021.637526; https://doi.pangaea.de/10.1594/PANGAEA.928720; https://doi.org/10.1594/PANGAEA.928720
Authors: Gerea, M., Queimaliños, C., Schiaffino, M.R., Izaguirre, I., Forn, I., Massana, R., Unrein, F.
Superior Title: J. Plankton Res. 2013;35(1):201-212
Subject Terms: CARD-FISH, Heterotrophic flagellates, Mixotrophic flagellates, Oligotrophic lakes, Prey selection, catalysis, digestive system, flagellate, heterotrophy, lake ecosystem, mixotrophy, morphology, oligotrophic environment, phylogenetics, phytoplankton, predation, prokaryote, protist, Antarctica, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Chrysophyceae, Mastigophora (flagellates), Ochromonas, Prokaryota, Protista
File Description: application/pdf
Relation: http://hdl.handle.net/20.500.12110/paper_01427873_v35_n1_p201_Gerea; http://repositoriouba.sisbi.uba.ar/gsdl/cgi-bin/library.cgi?a=d&c=artiaex&d=paper_01427873_v35_n1_p201_Gerea_oai
Authors: Gerea, M., Queimaliños, C., Schiaffino, M.R., Izaguirre, I., Forn, I., Massana, R., Unrein, F.
Superior Title: J. Plankton Res. 2013;35(1):201-212
Subject Terms: CARD-FISH, Heterotrophic flagellates, Mixotrophic flagellates, Oligotrophic lakes, Prey selection, catalysis, digestive system, flagellate, heterotrophy, lake ecosystem, mixotrophy, morphology, oligotrophic environment, phylogenetics, phytoplankton, predation, prokaryote, protist, Antarctica, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Chrysophyceae, Mastigophora (flagellates), Ochromonas, Prokaryota, Protista
File Description: application/pdf
Subject Terms: Archaea, targed with ARCH915 oligonucleotide FISH-probe, ARK-XXX/1.2, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD/Rosette with Underwater Vision Profiler, CTD-RO, CTD-RO_UVP, Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes, DEPTH, water, EG_I, EG_IV, Event label, Fluorescence determination of DAPI stain, Fram Strait, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, HG_I
Subject Geographic: MEDIAN LATITUDE: 79.228867 * MEDIAN LONGITUDE: 2.785411 * SOUTH-BOUND LATITUDE: 78.816000 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 79.921170 * EAST-BOUND LONGITUDE: 6.088500 * DATE/TIME START: 2016-06-26T04:57:00 * DATE/TIME END: 2016-07-10T02:23:00 * MINIMUM DEPTH, water: 13 m * MAXIMUM DEPTH, water: 5500 m
File Description: text/tab-separated-values, 748 data points
Relation: Oligonucleotide probes and formamide concentration s in LTER-HAUSGARTEN and adjacent stations in Fram Strait (URI: https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf); Pala, Claudia; Bienhold, Christina; Boetius, Antje; Salman-Carvalho, Verena (2019): CARD-FISH cell counts of Bacteria and Archaea in sediments of HAUSGARTEN, Fram Strait, from Polarstern cruise PS85. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.905210; Salman-Carvalho, Verena (2019): CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait. PANGAEA, https://doi.org/10.1594/PANGAEA.903569; https://doi.pangaea.de/10.1594/PANGAEA.905212; https://doi.org/10.1594/PANGAEA.905212
Authors: Alderkamp, Anne-Carlijn, Sintes, Eva, Herndl, Gerhard J.
Superior Title: Alderkamp , A-C , Sintes , E & Herndl , G J 2006 , ' Abundance and activity of major groups of prokaryotic plankton in the coastal North Sea during spring and summer ' , Aquatic Microbial Ecology , vol. 45 , no. 3 , pp. 237-246 . https://doi.org/10.3354/ame045237
Subject Terms: marine archaea, Bacteroidetes, Roseobacter, North Sea, CARD-FISH, microautoradiography, bacterial succession, Phaeocystis, IN-SITU HYBRIDIZATION, CATALYZED REPORTER DEPOSITION, DISSOLVED ORGANIC-MATTER, LEUCINE INCORPORATION, PHYTOPLANKTON BLOOM, BIOMASS PRODUCTION, ATTACHED BACTERIA, PELAGIC BACTERIA, MARINE-BACTERIA, ATLANTIC-OCEAN
File Description: application/pdf
Authors: Lora, Ulises
Contributors: Urmeneta, Jordi, Sala, M. Montserrat
Subject Terms: Airborne, Marine, CARD-FISH, Betaproteobacteria, SAR11, Firmicutes, Bacteroidetes
Relation: Sí; http://hdl.handle.net/10261/231642
Availability: http://hdl.handle.net/10261/231642
Authors: Bennke, C.M., Neu, Thomas, Fuchs, B.M., Amann, R.
Superior Title: ISSN: 0723-2020.
Subject Terms: Bacteroidetes, EPS, CARD-FISH, Lectins, Diatoms, Polysaccharides
File Description: application/pdf
Relation: https://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=13971; https://dx.doi.org/10.1016/j.syapm.2013.05.002
Subject Terms: Arctic Ocean, ARK-XXX/1.2, ARK-XXX/3, Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, CTD/Rosette, CTD/Rosette with Underwater Vision Profiler, CTD-RO, CTD-RO_UVP, Date/Time of event, DEPTH, sediment/rock, water, EG_I, EG_IV, Elevation of event, Event label, Fluorescence determination of DAPI stain, Fram Strait, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, HG_IV, Latitude of event, Longitude of event, Method/Device of event, Microbial abundance, cells
File Description: text/tab-separated-values, 56 data points
Relation: Oligonucleotide probes and formamide concentration of the water column and sediment samples from the Fram Strait and the central Arctic Ocean (URI: https://store.pangaea.de/Publications/Fadeev-etal_2019/Oligonucleotide-probes_Fadeev-etal_2019.pdf); https://doi.pangaea.de/10.1594/PANGAEA.906097
Subject Terms: Actinobacteria, targeted with HGC236 oligonucleotides FISH-probe, Actinomarinales, targeted with OM1-952 and OM1-389 oligonucleotides FISH-probe, Alphaproteobacteria, targeted with ALF968 oligonucleotides FISH-probe, Archaea, targed with ARCH915 oligonucleotide FISH-probe, ARK-XXVIII/2, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe, CARD-FISH, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), cell counts, Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe, Colwellia and Alteromonas, targeted with ALT1413 oligonucleiotide FISH-Probe, Cytophagales, targeted with CF319b oligonucleotides FISH-probe, Date/Time of event, Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes, Depth, bottom/max, sediment/rock, top/min, Elevation of event
Subject Geographic: MEDIAN LATITUDE: 79.104042 * MEDIAN LONGITUDE: 4.186290 * SOUTH-BOUND LATITUDE: 79.059170 * WEST-BOUND LONGITUDE: 2.882830 * NORTH-BOUND LATITUDE: 79.158330 * EAST-BOUND LONGITUDE: 6.106500 * DATE/TIME START: 2014-06-22T18:47:00 * DATE/TIME END: 2014-06-24T23:34:00 * MINIMUM DEPTH, sediment/rock: 0.005 m * MAXIMUM DEPTH, sediment/rock: 0.005 m
File Description: text/tab-separated-values, 84 data points
Relation: Cardozo-Mino, Magda Guadalupe; Salman-Carvalho, Verena; Boetius, Antje; Fadeev, Eduard (2019): CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2. PANGAEA, https://doi.org/10.1594/PANGAEA.905212; Salman-Carvalho, Verena (2019): CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait. PANGAEA, https://doi.org/10.1594/PANGAEA.903569; Oligonucleotide probes and formamide concentration in HAUSGARTEN surface sediments at stations HGI, HGIV, HGVI, and HGIX (URI: https://store.pangaea.de/Publications/Pala-etal_2019/Oligonucleotide-probes_Pala-etal_2019.pdf); https://doi.pangaea.de/10.1594/PANGAEA.905210
Authors: Gomez Pereira, Paola Rocio
Contributors: Amann, Rudolf, Smetacek, Victor
Subject Terms: Bacteroidetes, marine bacteria, microbiology, biogeography, metagenomics, fosmids, CARD-FISH, fluorescence in situ hybridization, picoplankton, nanophytoplankton, oceanic provinces, microbial ecology, 570 Life sciences, biology, ddc:570
Time: 570
File Description: application/pdf
Relation: https://media.suub.uni-bremen.de/handle/elib/2796; urn:nbn:de:gbv:46-diss000118634
Authors: Lora, Ulises
Contributors: Urmeneta, Jordi, Sala, M. Montserrat
Subject Terms: Airborne, Marine, CARD-FISH, Betaproteobacteria, SAR11, Firmicutes, Bacteroidetes, envir, geo
Relation: http://hdl.handle.net/10261/231642
Availability: http://hdl.handle.net/10261/231642
Authors: Schiaffino, M.R., Sánchez, M.L., Gerea, M., Unrein, F., Balagué, V., Gasol, J.M., Izaguirre, I.
Subject Terms: CARD-FISH, abundance, bacterium, dissolved organic carbon, electrokinesis, environmental modeling, environmental monitoring, hybridization, lake ecosystem, microorganism, seasonality, spatial distribution, taxonomy, Argentina, Patagonia, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Gammaproteobacteria
Authors: Gerea, M., Queimaliños, C., Schiaffino, M.R., Izaguirre, I., Forn, I., Massana, R., Unrein, F.
Subject Terms: CARD-FISH, Heterotrophic flagellates, Mixotrophic flagellates, Oligotrophic lakes, Prey selection, catalysis, digestive system, flagellate, heterotrophy, lake ecosystem, mixotrophy, morphology, oligotrophic environment, phylogenetics, phytoplankton, predation, prokaryote, protist, Antarctica, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Chrysophyceae, Mastigophora (flagellates), Ochromonas, Prokaryota, Protista
Authors: Romina Schiaffino, M., Laura Sanchez, M., Gerea, M., Unrein, F., Balague, V., Gasol, J.M., Izaguirre, I.
Subject Terms: Archaea, Bacteria, CARD-FISH, patagonian water bodies, prokaryotic group distribution patterns, organic carbon, Actinobacteria, Alphaproteobacteria, archaeon, Argentina, Article, bacterioplankton, bacterium, Bacteroidetes, Betaproteobacteria, catalysis, community structure, Crenarchaeota, denaturing gradient gel electrophoresis, Euryarchaeota, fluorescence in situ hybridization, Gammaproteobacteria, lake, nonhuman, phylum, polymerase chain reaction, priority journal, spring, trophic level, winter
Subject Terms: Archaea, Bacteria, CARD-FISH, patagonian water bodies, prokaryotic group distribution patterns, organic carbon, Actinobacteria, Alphaproteobacteria, archaeon, Argentina, Article, bacterioplankton, bacterium, Bacteroidetes, Betaproteobacteria, catalysis, community structure, Crenarchaeota, denaturing gradient gel electrophoresis, Euryarchaeota, fluorescence in situ hybridization, Gammaproteobacteria, lake, nonhuman, phylum, polymerase chain reaction, priority journal, spring, trophic level, winter
Relation: https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00908258_v38_n1_p64_RominaSchiaffino; http://hdl.handle.net/20.500.12110/paper_00908258_v38_n1_p64_RominaSchiaffino
Subject Terms: CARD-FISH, abundance, bacterium, dissolved organic carbon, electrokinesis, environmental modeling, environmental monitoring, hybridization, lake ecosystem, microorganism, seasonality, spatial distribution, taxonomy, Argentina, Patagonia, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Gammaproteobacteria
Relation: https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_01427873_v38_n1_p64_Schiaffino; http://hdl.handle.net/20.500.12110/paper_01427873_v38_n1_p64_Schiaffino
Authors: Queimaliños, Claudia Patricia, Schiaffino, Maria Romina, Izaguirre, Irina, Unrein, Fernando
Subject Terms: CARD-FISH, Heterotrophic flagellates, Mixotrophic flagellates, Oligotrophic lakes, Prey selection, catalysis, digestive system, flagellate, heterotrophy, lake ecosystem, mixotrophy, morphology, oligotrophic environment, phylogenetics, phytoplankton, predation, prokaryote, protist, Antarctica, Actinobacteria, Alphaproteobacteria, Archaea, Bacteria (microorganisms), Bacteroidetes, Betaproteobacteria, Chrysophyceae, Mastigophora (flagellates), Ochromonas, Prokaryota, Protista
Relation: https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_01427873_v35_n1_p201_Gerea; http://hdl.handle.net/20.500.12110/paper_01427873_v35_n1_p201_Gerea
Authors: Gomez Pereira, Paola Rocio
Contributors: Amann, Rudolf, Smetacek, Victor
Subject Terms: Bacteroidetes, marine bacteria, microbiology, biogeography, metagenomics, fosmids, CARD-FISH, fluorescence in situ hybridization, picoplankton, nanophytoplankton, oceanic provinces, microbial ecology, 570 Life sciences, biology, ddc:570, envir, geo
Time: 570
Availability: https://media.suub.uni-bremen.de/handle/elib/2796