Authors: Xin Zeng, Fan-Fang Meng, Meng-Liang Wen, Shu-Juan Li, Yi Li
Superior Title: BMC Genomics, Vol 25, Iss 1, Pp 1-13 (2024)
Subject Terms: Multi-category prediction of protein-protein interactions, Graph neural network, Global graphs, Local subgraphs, Asymmetric loss function, Biotechnology, TP248.13-248.65, Genetics, QH426-470
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2164
Authors: Ping Zhang, Weicheng Sun, Dengguo Wei, Guodong Li, Jinsheng Xu, Zhuhong You, Bowei Zhao, Li Li
Superior Title: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-18 (2023)
Subject Terms: Piwi-interacting RNA, Disease, Subgraph projection, Feature augmentation, Graph convolutional network, piRNA-disease associations, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2105
Authors: Jens Uwe Loers, Vanessa Vermeirssen
Superior Title: BMC Bioinformatics, Vol 23, Iss 1, Pp 1-31 (2022)
Subject Terms: Composite subgraphs, Multi-edge networks, Network analysis, Multi-omics, Modules, Gene regulation, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2105
Authors: Pietro Hiram Guzzi, Giuseppe Tradigo, Pierangelo Veltri
Superior Title: BMC Bioinformatics, Vol 22, Iss S15, Pp 1-15 (2022)
Subject Terms: Dual networks, Graphs, Densest subgraph, Communities, Social Networks, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2105
Authors: Saeed Salem, Mohammed Alokshiya, Mohammad Al Hasan
Superior Title: BioData Mining, Vol 14, Iss 1, Pp 1-23 (2021)
Subject Terms: Biological networks, Subgraph enumeration, Frequent subgraphs, Maximal subgraphs, Reverse search, Computer applications to medicine. Medical informatics, R858-859.7, Analysis, QA299.6-433
File Description: electronic resource
Relation: https://doaj.org/toc/1756-0381
Authors: Nicola Licheri, Vincenzo Bonnici, Marco Beccuti, Rosalba Giugno
Superior Title: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-24 (2021)
Subject Terms: Query processing, Pattern matching, Subgraph isomorphism, Graph indexing, Decision diagrams, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: https://doaj.org/toc/1471-2105
Authors: Li, Ruiming, Lee, Jung-Yu, Yang, Jinn-Moon, Akutsu, Tatsuya
Contributors: 李, 瑞明, 阿久津, 達也, 90261859
Subject Terms: Bioinformatics, Hot spot, Protein-protein interaction, Residue interaction, Network analysis, Graph theory, Densest subgraph, Linear programming
Relation: http://hdl.handle.net/2433/284498; BMC Bioinformatics; 23; 451
Availability: http://hdl.handle.net/2433/284498
Superior Title: Algorithms for Molecular Biology, Vol 15, Iss 1, Pp 1-16 (2020)
Subject Terms: Cytoplasmic incompatibility, Chain subgraph cover problem, Enumeration algorithms, Exact exponential algorithms, Interval order, Biology (General), QH301-705.5, Genetics, QH426-470
File Description: electronic resource
Authors: Salem, Saeed, Alokshiya, Mohammed, Hasan, Mohammad Al
Contributors: Computer and Information Science, School of Science
Superior Title: PMC
Subject Terms: Biological networks, Subgraph enumeration, Frequent subgraphs, Maximal subgraphs, Reverse search
File Description: application/pdf
Relation: BioData Mining; Salem S, Alokshiya M, Hasan MA. RASMA: a reverse search algorithm for mining maximal frequent subgraphs. BioData Min. 2021;14(1):19. Published 2021 Mar 16. doi:10.1186/s13040-021-00250-1; https://hdl.handle.net/1805/29476
Authors: Aida Mrzic, Pieter Meysman, Wout Bittremieux, Pieter Moris, Boris Cule, Bart Goethals, Kris Laukens
Superior Title: BioData Mining, Vol 11, Iss 1, Pp 1-24 (2018)
Subject Terms: Subgraph mining, Frequent subgraphs, Graph motifs, Biological networks, Pattern discovery, Pattern mining, Computer applications to medicine. Medical informatics, R858-859.7, Analysis, QA299.6-433
File Description: electronic resource
Authors: Mohammed Alokshiya, Saeed Salem, Fidaa Abed
Superior Title: BMC Bioinformatics, Vol 20, Iss S12, Pp 1-11 (2019)
Subject Terms: Biological networks, Subgraph enumeration, Reverse search, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: http://link.springer.com/article/10.1186/s12859-019-2837-y; https://doaj.org/toc/1471-2105
Authors: Shunyun Yang, Runxin Guo, Rui Liu, Xiangke Liao, Quan Zou, Benyun Shi, Shaoliang Peng
Superior Title: BMC Bioinformatics, Vol 19, Iss S4, Pp 35-47 (2018)
Subject Terms: Frequent subgraph mining, Bioinformatics, Memory constraints, Isomorphism, Many integrated Core (MIC), Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
File Description: electronic resource
Relation: http://link.springer.com/article/10.1186/s12859-018-2071-z; https://doaj.org/toc/1471-2105
Authors: Ehrlich Hans-Christian, Rarey Matthias
Superior Title: Journal of Cheminformatics, Vol 4, Iss 1, p 13 (2012)
Subject Terms: Substructure search, Subgraph isomorphism, Algorithm, Benchmark, SMARTS, Chemical pattern search, Information technology, T58.5-58.64, Chemistry, QD1-999
Relation: http://www.jcheminf.com/content/4/1/13; https://doaj.org/toc/1758-2946; https://doaj.org/article/06228904bac8406e85631a83d23221d3
Authors: Tran, Ha-Nguyen, Cambria, Erik, Hussain, Amir
Subject Terms: Common-sense reasoning, Subgraph matching, GPU computing, CUDA, 004 Data processing & computer science, QA75 Electronic computers. Computer science