Authors: García-Espinoza, F.^1,2, García, M. J.¹, Quesada-Moraga, E.¹, Yousef-Yousef, M.¹ z12yonam@uco.es

Superior Title: Applied & Environmental Microbiology. Aug2023, Vol. 89 Issue 8, p1-22. 22p.

Subject Terms: *SPODOPTERA littoralis, *REVERSE transcriptase polymerase chain reaction, *CUCURBITACEAE, *INTEGRATED pest control, *LETHAL mutations, *PLANT nutrients, *CUCUMBERS

Authors: Yuanhan Zhao, Ke Lin, Haocheng Zhang, Yanliang Zhang, Shaling Li, Shengguo Zhang, Wei Zhang, Aiming Zhou, Yangyang Zhuang, Jie Chen, Caixia Wu, Wei Zhou, Xiaoju He, Qiaoyan Yue, Meng Zhang, Yan Huang, Liang Li, Liang Hong, Fujing Cai, Lisu Huang, Zhengshang Ruan, Shanshan Xu, Yan Zhang, Xiaohua Chen, Ying Ye, Tingting Bian, Jiabin Li, Jun Yin, Xiang Li, Lijing Jiang, Chen Lei, Jun Liu, Ying Zhang, Jialin Jin, Jingwen Ai, Jingye Pan, Wenhong Zhang

Superior Title: Microbiology Spectrum, Vol 12, Iss 5 (2024)

Subject Terms: sepsis, droplet digital polymerase chain reaction, pathogen load, polymicrobial infection, mortality, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/1f78828c41d542e1ba82dc1adfa77168

Authors: Mary Jane E. Vaeth, Minahil Cheema, Sarah Omer, Ishaan Gupta, Kristie J. Sun, Asia Mitchell, Maryam Elhabashy, Maisha Foyez, Aamna Cheema, Binish Javed, Sophia Purekal, Resham Rahat, Henry Michtalik, Charles Locke, Melinda Kantsiper, James D. Campbell, E. Adrianne Hammershaimb, Yukari C. Manabe, Matthew L. Robinson, J. Kristie Johnson, Lucy E. Wilson, Charles W. Callahan, Zishan K. Siddiqui

Superior Title: Microbiology Spectrum, Vol 12, Iss 3 (2024)

Subject Terms: COVID-19, BinaxNOW COVID-19 rapid antigen tests, polymerase chain reaction (PCR) testing, clinician-performed tests, self-administered COVID-19 tests, accuracy of COVID-19 tests, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/c4c2a9cfa9c6427e9e41f3a40c200666

Authors: Guido Benedetti, Christian Holm Hansen, Anna Tølbøll Svendsen, Katrine Grimstrup Joensen, Gitte Sørensen, Anne Line Engsbro, Mia Torpdahl, Eva Møller Nielsen, Steen Ethelberg

Superior Title: Microbiology Spectrum, Vol 12, Iss 1 (2024)

Subject Terms: foodborne diseases, epidemiological monitoring, public health surveillance, Campylobacter, culture techniques, polymerase chain reaction, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/f6cb013eded84759a6f72fcd43f8e2a8

Authors: Nanqing Zhou¹, Keffer, Jessica L.², Polson, Shawn W.^3,4, Chan, Clara S.^1,2 cschan@udel.edu

Superior Title: Applied & Environmental Microbiology. Jan2022, Vol. 88 Issue 2, p1-16. 16p.

Subject Terms: *REVERSE transcriptase polymerase chain reaction, *OXIDIZING agents, *GENE expression profiling, *CARBON fixation, *ELECTRON transport

Authors: Yumi Shimomura, Yutaka Sugi, Aiko Kume, Wataru Tanaka, Tsutomu Yoshihara, Tetsuya Matsuura, Yasuhiko Komiya, Yusuke Ogata, Wataru Suda, Masahira Hattori, Takuma Higurashi, Atsushi Nakajima, Mitsuharu Matsumoto

Superior Title: Microbiology Spectrum, Vol 11, Iss 6 (2023)

Subject Terms: Fusobacterium nucleatum, colorectal cancer, CRISPR–Cas system, polymerase chain reaction, strain level, saliva, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/5ba4a3890aa94dfaa129a6f068a4e595

Authors: Ei T. Aung, Christopher K. Fairley, Deborah A. Williamson, Francesca Azzato, Rebecca Wigan, Julien Tran, Andrew Buchanan, Tina Schmidt, Eric P. F. Chow, Marcus Y. Chen

Superior Title: Microbiology Spectrum, Vol 11, Iss 5 (2023)

Subject Terms: MSM, syphilis, Treponema pallidum, PCR, polymerase chain reaction tests, syphilis screening, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/34f5cc8046d94bdea6d6c9d2aadb715d

Authors: Chiapello, M.¹, Bosco, L.², Ciuffo, M.¹, Ottati, S.^1,2, Salem, N.³, Rosa, C.⁴, Tavella, L.², Turina, M.¹

Superior Title: Journal of Virology. Nov2021, Vol. 95 Issue 21, p1-92. 92p.

Subject Terms: *THRIPS, *REVERSE transcriptase polymerase chain reaction, *TOMATO spotted wilt virus disease, *FUNGAL viruses, *PLANT viruses, *COVID-19, *HORTICULTURAL crops

Geographic Terms: BALTIMORE (Md.), ITALY

Authors: Felix, Benjamin, Capitaine, Karine, Te, Sandrine, Felten, Arnaud, Gillot, Guillaume, Feurer, Carole, van den Bosch, Tijs, Torresi, Marina, Sréterné Lancz, Zsuzsanna, Delannoy, Sabine, Brauge, Thomas, Midelet, Graziella, Leblanc, Jean-Charles, Roussel, Sophie

Contributors: Laboratoire de sécurité des aliments de Maisons-Alfort (LSAl), Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), Laboratoire de Ploufragan-Plouzané-Niort ANSES, ADRIA Développement, Institut du Porc (IFIP), Wageningen Food Safety Research (WFSR), Wageningen University and Research Wageningen (WUR), Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise "Giuseppe Caporale" (IZS Teramo), Partenaires INRAE, National Food Chain Safety Office (NEBIH), Laboratoire de Boulogne sur mer, This work was conducted as part of the annual work program of the European Union Reference Laboratory (EURL) for Listeria monocytogenes (period 2020 to 2022). This work was cofunded by the European Union. The EURL for L. monocytogenes funded the biological material exchange and analysis performed jointly with other NRLs for multiplex real-time PCR validation. The validation study was partially funded by the Confederation of Marine Fisheries and Aquaculture Product Processing Industries (CITPPM). It funded the validation study performed on high-throughput real-time PCR. Wageningen Food Safety Research was funded by the Netherlands Food and Consumer Product Safety Authority. It funded part of the analysis performed in the Netherlands for multiplex PCR method validation and application.

Superior Title: ISSN: 2165-0497 ; Microbiology Spectrum ; https://anses.hal.science/anses-04170563 ; Microbiology Spectrum, 2023, 11 (3), ⟨10.1128/spectrum.03954-22⟩ ; https://journals.asm.org/doi/10.1128/spectrum.03954-22.

Subject Terms: Listeria monocytogenes, MLST, food, food processing environment, highthroughput real-time PCR, clonal complexes, conventional multiplex real-time PCR, MESH: Europe, MESH: Food Microbiology, MESH: Listeria monocytogenes, MESH: Listeriosis, MESH: Multilocus Sequence Typing, MESH: Real-Time Polymerase Chain Reaction, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/37158749; anses-04170563; https://anses.hal.science/anses-04170563; https://anses.hal.science/anses-04170563/document; https://anses.hal.science/anses-04170563/file/spectrum.03954-22.pdf; PUBMED: 37158749; PUBMEDCENTRAL: PMC10269651

Availability: https://doi.org/10.1128/spectrum.03954-22
https://anses.hal.science/anses-04170563
https://anses.hal.science/anses-04170563/document
https://anses.hal.science/anses-04170563/file/spectrum.03954-22.pdf

Authors: Landaverde, Lena, Turcinovic, Jacquelyn, Doucette-Stamm, Lynn, Gonzales, Kevin, Platt, Judy, Connor, John H., Klapperich, Catherine

Subject Terms: BinaxNow, COVID-19, Omicron, RT-PCR, SARS-CoV-2, Anterior nares, Antigen, Rapid diagnostic tests, Humans, Pandemics, Reverse transcription, Polymerase chain reaction

Subject Geographic: United States

File Description: p. e0130722; Print-Electronic

Relation: Microbiology Spectrum; https://www.ncbi.nlm.nih.gov/pubmed/36255297; L. Landaverde, J. Turcinovic, L. Doucette-Stamm, K. Gonzales, J. Platt, J.H. Connor, C. Klapperich. 2022. "Comparison of BinaxNOW and SARS-CoV-2 qRT-PCR Detection of the Omicron Variant from Matched Anterior Nares Swabs." Microbiology Spectrum, Volume 10, Issue 6, pp.e0130722-. https://doi.org/10.1128/spectrum.01307-22; https://hdl.handle.net/2144/45833; 0000-0002-8867-7256 (Connor, John H); 0000-0001-6103-849X (Klapperich, Catherine); 766811

Availability: https://doi.org/10.1128/spectrum.01307-22
https://hdl.handle.net/2144/45833
https://www.ncbi.nlm.nih.gov/pubmed/36255297

Authors: Chamteut Oh^1,2 co14@illinois.edu, Aijia Zhou¹, O'Brien, Kate³, Schmidt IV, Arthur R.¹, Geltz, Joshua⁴, Shisler, Joanna L.⁵, Schmidt, Arthur R.¹, Keefer, Laura⁶, Brown, William M.⁷, Nguyen, Thanh H.^1,8,9

Superior Title: Applied & Environmental Microbiology. Oct2023, Vol. 89 Issue 10, p1-21. 21p.

Subject Terms: *NOROVIRUSES, *GENETIC variation, *POLYMERASE chain reaction, *NUCLEIC acids

Authors: Richard H. Heineman

Superior Title: Journal of Microbiology & Biology Education, Vol 23, Iss 3 (2022)

Subject Terms: pedagogy, education, teaching, PCR, polymerase chain reaction, primer, Special aspects of education, LC8-6691, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1935-7877; https://doaj.org/toc/1935-7885

Access URL: https://doaj.org/article/80d5c79eeb794dbca0d5294ca74893ff

Authors: Caméléna, François¹, Birgy, André^1,2, Smail, Yasmine¹, Courroux, Céline¹, Mariani-Kurkdjian, Patricia^1,2, Le Hello, Simon³, Bonacorsi, Stéphane^1,2 stephane.bonacorsi@aphp.fr, Bidet, Philippe^1,2

Superior Title: Applied & Environmental Microbiology. Mar2019, Vol. 85 Issue 6, p1-35. 35p.

Subject Terms: *POLYMERASE chain reaction, *POLYACRYLAMIDE gel electrophoresis, *TANDEM repeats, *ESCHERICHIA coli, *GEL electrophoresis

Authors: Weina Yu^1,2, Jinxuan Cao¹, Wenfang Dai^1,2, Qiongfen Qiu¹, Jinbo Xiong^1,2 xiongjinbo@nbu.edu.cn

Superior Title: Applied & Environmental Microbiology. Sep2018, Vol. 84 Issue 18, p1-32. 35p.

Subject Terms: *POLYMERASE chain reaction, *GUT microbiome, *SHRIMP diseases, *DISEASE incidence, *DIAGNOSIS, *ANIMAL health, *MANAGEMENT

Authors: Bingshao Liang, Zhile Xiong, Zhuwei Liang, Chao Zhang, Hao Cai, Yan Long, Fei Gao, Jielin Wang, Qiulian Deng, Huamin Zhong, Yongqiang Xie, Lianfen Huang, Sitang Gong, Zhenwen Zhou

Superior Title: Microbiology Spectrum, Vol 10, Iss 3 (2022)

Subject Terms: methicillin–resistant Staphylococcus aureus, oxacillin– and cefoxitin–susceptible mecA–positive Staphylococcus aureus, mecA, blaZ, third-generation sequencing, quantitative polymerase chain reaction, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/56bd46769056487e9a9acd02d1cf5214

Authors: Yu Fu, Qingsong Chen, Mengyuan Xiong, Jin Zhao, Shucheng Shen, Liangjun Chen, Yunbao Pan, Zhiqiang Li, Yirong Li

Superior Title: Microbiology Spectrum, Vol 10, Iss 2 (2022)

Subject Terms: clinical performance, infectious diseases, nanopore targeted sequencing, polymerase chain reaction, sanger sequencing, sensitivity, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/6b4bfc909d714159befd00a5ec2333da

Authors: Fei Li, Yuhan Zhang, Peng Shi, Linfeng Cao, Liyun Su, Pan Fu, Kuerbanjiang Abuduxikuer, Libo Wang, Yin Wang, Roujian Lu, Wenjie Tan, Jun Shen

Superior Title: Microbiology Spectrum, Vol 10, Iss 2 (2022)

Subject Terms: severe community-acquired pneumonia, consolidation, pathogen, alveolar lavage fluid, multiple polymerase chain reaction, children, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/734df52403c64c109f8028b8a96f5710

Authors: Jianyu Lai, Jennifer German, Filbert Hong, S.-H. Sheldon Tai, Kathleen M. McPhaul, Donald K. Milton

Superior Title: Microbiology Spectrum, Vol 10, Iss 2 (2022)

Subject Terms: COVID-19, SARS-CoV-2, midturbinate swab, polymerase chain reaction, saliva, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/9db5ab9aa7d14218be3e4ea36347d8f1

Authors: Merlin Jayalal Lawrence Panchali, Hyeon Jeong Oh, You Mi Lee, Choon-Mee Kim, Misbah Tariq, Jun-Won Seo, Da Young Kim, Na Ra Yun, Dong-Min Kim

Superior Title: Microbiology Spectrum, Vol 10, Iss 1 (2022)

Subject Terms: COVID-19, SARS-CoV-2, specificity, sensitivity, real-time polymerase chain reaction, NP gene, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/b3bc65760e6e47709f803d67bf436238

Authors: Ayo Ogundero, Marta Vignola, Stephanie Connelly, William T. Sloan

Superior Title: Microbiology Spectrum, Vol 10, Iss 1 (2022)

Subject Terms: flow cytometry method (FCM), predatory bacteria, Bdellovibrio, quantitative polymerase chain reaction (qPCR), plaque forming unit, predator dynamics, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/c75be6a9fe574eafb07224866ab7f8d6