Authors: Fadeev, Eduard, Cardozo-Mino, Magda Guadalupe, Rapp, Josephine Z, Bienhold, Christina, Salter, Ian, Salman-Carvalho, Verena, Molari, Massimiliano, Tegetmeyer, Halina E, Buttigieg, Pier Luigi, Boetius, Antje
Subject Terms: 2-(4-Amidinophenyl)-1H-indole-6-carboxamidine, Alteromonas, cells, ARK-XXX/1.2, Bacteroidetes, CARD-FISH, cell counts, CTD/Rosette with Underwater Vision Profiler, CTD-RO_UVP, DEPTH, ice/snow, water, EG_I, EG_IV, Event label, Fram Strait, Gammaproteobacteria, Giant box corer, GKG, ICE, Ice station, North Greenland Sea, Polaribacter, Polarstern, PS99/043-3, PS99/048-15, PS99/051-2, PS99/053-8, PS99.2, SAR11 clade
File Description: text/tab-separated-values, 48 data points
Relation: Fadeev, Eduard; Cardozo-Mino, Magda Guadalupe; Rapp, Josephine Z; Bienhold, Christina; Salter, Ian; Salman-Carvalho, Verena; Molari, Massimiliano; Tegetmeyer, Halina E; Buttigieg, Pier Luigi; Boetius, Antje (2021): Comparison of Two 16S rRNA Primers (V3–V4 and V4–V5) for Studies of Arctic Microbial Communities. Frontiers in Microbiology, 12, https://doi.org/10.3389/fmicb.2021.637526; https://doi.pangaea.de/10.1594/PANGAEA.928720; https://doi.org/10.1594/PANGAEA.928720
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB15703-4, Maria S. Merian, MSM18/1, Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe, Synechococcus, targeted with SYN405 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.751667 * LONGITUDE: -18.736667 * DATE/TIME START: 2011-04-29T13:38:00 * DATE/TIME END: 2011-04-29T13:38:00 * MINIMUM DEPTH, water: 53 m * MAXIMUM DEPTH, water: 2600 m
Time: 603
File Description: text/tab-separated-values, 180 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889461; https://doi.org/10.1594/PANGAEA.889461
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB15709-3, Maria S. Merian, MSM18/1, Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe, Synechococcus, targeted with SYN405 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 21.252500 * LONGITUDE: -20.817000 * DATE/TIME START: 2011-05-03T23:47:00 * DATE/TIME END: 2011-05-03T23:47:00 * MINIMUM DEPTH, water: 60 m * MAXIMUM DEPTH, water: 4100 m
Time: 610
File Description: text/tab-separated-values, 180 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889463; https://doi.org/10.1594/PANGAEA.889463
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14209-2, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.499660 * LONGITUDE: -17.732500 * DATE/TIME START: 2010-03-05T07:29:00 * DATE/TIME END: 2010-03-05T07:29:00 * MINIMUM DEPTH, water: 15 m * MAXIMUM DEPTH, water: 250 m
Time: 22-10
File Description: text/tab-separated-values, 96 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889460; https://doi.org/10.1594/PANGAEA.889460
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14207-1, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.583160 * LONGITUDE: -17.999830 * DATE/TIME START: 2010-03-03T12:41:00 * DATE/TIME END: 2010-03-03T12:41:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 700 m
Time: 22-10
File Description: text/tab-separated-values, 116 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889459; https://doi.org/10.1594/PANGAEA.889459
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Alteromonas/Colwellia, targeted with Alt1413 oligonucleotide FISH-probe, Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB15704-3, Maria S. Merian, MSM18/1, Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe, Synechococcus, targeted with SYN405 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.585667 * LONGITUDE: -18.005333 * DATE/TIME START: 2011-05-01T08:39:00 * DATE/TIME END: 2011-05-01T08:39:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 700 m
Time: 604
File Description: text/tab-separated-values, 135 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889462; https://doi.org/10.1594/PANGAEA.889462
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14204-3, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 19.166830 * LONGITUDE: -20.999830 * DATE/TIME START: 2010-03-01T16:21:00 * DATE/TIME END: 2010-03-01T16:21:00 * MINIMUM DEPTH, water: 65.00 m * MAXIMUM DEPTH, water: 1000.00 m
Time: 22-10
File Description: text/tab-separated-values, 93 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889458; https://doi.org/10.1594/PANGAEA.889458
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14202-6, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 20.743330 * LONGITUDE: -18.717330 * DATE/TIME START: 2010-02-27T18:02:00 * DATE/TIME END: 2010-02-27T18:02:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 2650 m
Time: 22-10
File Description: text/tab-separated-values, 129 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889457; https://doi.org/10.1594/PANGAEA.889457
Authors: Thiele, Stefan, Basse, Andreas, Becker, Jamie W, Lipski, André, Iversen, Morten Hvitfeldt, Mollenhauer, Gesine
Subject Terms: Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe, Bacteroidetes, targeted with CF319a oligonucleotide FISH-probe, Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe, CTD/Rosette, CTD-RO, DEPTH, water, Euryarchaeota marine group II, targeted with Eury806 oligonucleotide FISH-probe, Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe, GeoB14201-6, POS396, Poseidon, Roseobacter clade, targeted with ROS537 oligonucleotides FISH-probe, SAR11 clade, targeted with SAR11-441 oligonucleotide FISH-probe
Subject Geographic: LATITUDE: 21.263330 * LONGITUDE: -20.842830 * DATE/TIME START: 2010-02-26T08:48:00 * DATE/TIME END: 2010-02-26T08:48:00 * MINIMUM DEPTH, water: 20 m * MAXIMUM DEPTH, water: 4100 m
Time: 22-10
File Description: text/tab-separated-values, 162 data points
Relation: https://doi.org/10.1594/PANGAEA.889467; Thiele, Stefan; Basse, Andreas; Becker, Jamie W; Lipski, André; Iversen, Morten Hvitfeldt; Mollenhauer, Gesine (2019): Microbial communities in the nepheloid layers and hypoxic zones of the Canary Current upwelling system. Microbiology Open, 8(5), e00705, https://doi.org/10.1002/mbo3.705; https://doi.pangaea.de/10.1594/PANGAEA.889456; https://doi.org/10.1594/PANGAEA.889456
Subject Terms: Accession number, genetics, AEGEAN-169 marine group, targeted with the AEGEAN-169 mix oligonucleotide FISH-probes, Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH), CTD/Rosette, CTD-RO, DEPTH, water, Event label, Flow cytometry, Microbial abundance, cells, Number, Prochlorococcus, targeted with PRO405 oligonucleotide FISH-probe, SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade, SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe, SAR324 clade, targeted with SAR324-1412 oligonucleotide FISH-probe, SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe, SAR86 clade, targeted with SAR86-1245 oligonucleotide FISH-probe, SO245, SO245_10-1, SO245_1-1, SO245_11-1, SO245_12-2
Subject Geographic: MEDIAN LATITUDE: -30.101353 * MEDIAN LONGITUDE: -121.254259 * SOUTH-BOUND LATITUDE: -39.310400 * WEST-BOUND LONGITUDE: -170.000180 * NORTH-BOUND LATITUDE: -23.491900 * EAST-BOUND LONGITUDE: -84.562420 * DATE/TIME START: 2015-12-25T18:03:00 * DATE/TIME END: 2016-01-24T04:30:00 * MINIMUM DEPTH, water: 5 m * MAXIMUM DEPTH, water: 5125 m
File Description: text/tab-separated-values, 2922 data points
Relation: Reintjes, Greta; Tegetmeyer, Halina E; Bürgisser, Miriam; Orlic, Sandi; Tews, Ivo; Zubkov, Mikhail V; Voß, Daniela; Zielinski, Oliver; Quast, Christian; Glöckner, Frank Oliver; Amann, Rudolf; Ferdelman, Timothy G; Fuchs, Bernhard M (2019): On-Site Analysis of Bacterial Communities of the Ultraoligotrophic South Pacific Gyre. Applied and Environmental Microbiology, 85(14), https://doi.org/10.1128/AEM.00184-19; Reintjes, Greta; Amann, Rudolf I; Arnosti, Carol; Fuchs, Bernhard M (2020): Microbial community composition and polysaccharide processing potential in the South Pacific Gyre. European Nucleotide Archive (ENA), insdc:PRJEB40503; Oligonucleotide probes and formamide concentration used in Reintjes etal., 2017 (URI: https://store.pangaea.de/Publications/Reintjes-etal_2017/Oligonucleotide-probes_Reintjes-etal_2017.pdf); https://doi.pangaea.de/10.1594/PANGAEA.882015; https://doi.org/10.1594/PANGAEA.882015